RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 C4orf47A7E2U8 309 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 ASAP2O43150 1006 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 DKC1O60832 514 aaKnown RBP eCLIP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 GAS7O60861 476 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 RHOBTB1O94844 696 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 LRG1P02750 347 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 CELA2BP08218 269 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 FCARP24071 287 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 CCNE1P24864 410 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 HOXA11P31270 313 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MCM5P33992 734 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 AFF1P51825 1210 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 SRSF5Q13243 272 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 TUSC3Q13454 348 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 DRP2Q13474 957 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 GAS6Q14393 721 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 GRM2Q14416 872 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PTPAQ15257 358 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MTERF2Q49AM1 385 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 UBXN11Q5T124 520 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 C20orf194Q5TEA3 1177 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 HEATR6Q6AI08 1181 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 WWC2Q6AWC2 1192 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PRSS55Q6UWB4 352 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 LYSMD3Q7Z3D4 306 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PDZD3Q86UT5 571 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 RALGPS2Q86X27 583 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MFSD6LQ8IWD5 586 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MB21D2Q8IYB1 491 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 ELMOD1Q8N336 334 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 CAMKK1Q8N5S9 505 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 FANCBQ8NB91 859 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 SMG8Q8ND04 991 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 GLIS3Q8NEA6 775 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 LNX1Q8TBB1 728 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 LRRN4Q8WUT4 740 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 TCP11Q8WWU5 503 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 RUFY2Q8WXA3 655 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PSPC1Q8WXF1 523 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 ING5Q8WYH8 240 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MCRS1Q96EZ8 462 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PGBD1Q96JS3 809 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 CEP89Q96ST8 783 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 GAD1Q99259 594 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 TEKT3Q9BXF9 490 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 PLA2G2FQ9BZM2 168 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 TRPV4Q9HBA0 871 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 HCFC1R1Q9NWW0 138 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 BARHL2Q9NY43 387 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 MAFFQ9ULX9 164 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 ZNF638Q14966 1978 aaKnown RBP5.43□□□□□ -1.54
SDCBP-207ENST00000520168 SHROOM3Q8TF72 1996 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 CNTNAP5Q8WYK1 1306 aa5.43□□□□□ -1.54
SDCBP-207ENST00000520168 DENND4CQ5VZ89 1909 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 PCNX2A6NKB5 2137 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ESYT2A0FGR8 921 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 LNP1A1A4G5 178 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 WDR27A2RRH5 827 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 MYBPHLA2RUH7 354 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ARNTLO00327 626 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 KHNYNO15037 678 aaKnown RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CHADO15335 359 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 TRAPPC3O43617 180 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CAVIN2O95810 425 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CEBPBP17676 345 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 GNA11P29992 359 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ELF1P32519 619 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CIITAP33076 1130 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 DPP6P42658 865 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 PTGIRP43119 386 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 KPNA1P52294 538 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ANTXR2P58335 489 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 POU5F1BQ06416 359 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 FCHO2Q0JRZ9 810 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 LMAN2Q12907 356 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 HDAC1Q13547 482 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CCINQ13939 588 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 HNRNPDQ14103 355 aaKnown RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 MXD4Q14582 209 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 NR6A1Q15406 480 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 SLC5A9Q2M3M2 681 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 PRR16Q569H4 304 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 FAM78AQ5JUQ0 283 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 PRSS36Q5K4E3 855 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 CYP4A22Q5TCH4 519 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 FAM171A1Q5VUB5 890 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 LRCH2Q5VUJ6 765 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 FOXD4L5Q5VV16 416 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 VITQ6UXI7 678 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 SYNE3Q6ZMZ3 975 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ANKS3Q6ZW76 656 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 PDZD4Q76G19 769 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 HAUS6Q7Z4H7 955 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 KBTBD6Q86V97 674 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 SGMS1Q86VZ5 419 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 YAF2Q8IY57 180 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 REXO1Q8N1G1 1221 aaKnown RBP5.42□□□□□ -1.54
SDCBP-207ENST00000520168 ADAM32Q8TC27 787 aa5.42□□□□□ -1.54
SDCBP-207ENST00000520168 BICD2Q8TD16 824 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms