RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 CHADO15335 359 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 KCNE1P15382 129 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 RPA1P27694 616 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 MCM7P33993 719 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 CCDC6Q16204 474 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 ECM1Q16610 540 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 ZNF568Q3ZCX4 644 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 ZNF280DQ6N043 979 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 TAS1R3Q7RTX0 852 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 TMC8Q8IU68 726 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 LEMD2Q8NC56 503 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 TTC8Q8TAM2 541 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 CSGALNACT1Q8TDX6 532 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 DDX1Q92499 740 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 MSANTD3Q96H12 275 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 LRRC3BQ96PB8 259 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 CCDC94Q9BW85 323 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 CRISPLD1Q9H336 500 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 CNTN3Q9P232 1028 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 YIPF1Q9Y548 306 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 NUB1Q9Y5A7 615 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 DMXL2Q8TDJ6 3036 aa12.43□□□□□ -0.42
CTNNA1-205ENST00000517904 LAMA5O15230 3695 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 DSPP15924 2871 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 A0A1W2PRU2 124 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 K7ERI5 159 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 ABLIM1O14639 778 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 LARGE1O95461 756 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 CPB1P15086 417 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 HOXA6P31267 233 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 CTHP32929 405 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 MCM4P33991 863 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 KPNA1P52294 538 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 FOSBP53539 338 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 LIMK1P53667 647 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 SHC2P98077 582 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 CCINQ13939 588 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 IL31Q6EBC2 164 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 CEP68Q76N32 757 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 WDR5BQ86VZ2 330 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 YAF2Q8IY57 180 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 NECAB1Q8N987 351 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 BEST2Q8NFU1 509 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 DDX12PQ92771 950 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 E2F7Q96AV8 911 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 ZFYVE19Q96K21 471 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 MKNK1Q9BUB5 465 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 GPR88Q9GZN0 384 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 ARRDC1-AS1Q9H2J1 176 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 C8orf33Q9H7E9 229 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 GTSE1Q9NYZ3 720 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 MAFFQ9ULX9 164 aa12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-205ENST00000517904 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 AXIN1O15169 862 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 PROZP22891 400 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 RPL9P32969 192 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 PON2Q15165 354 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 PKN3Q6P5Z2 889 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 RALGPS2Q86X27 583 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 ARID3BQ8IVW6 561 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 ACAP3Q96P50 834 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 PGLYRP2Q96PD5 576 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 BHMT2Q9H2M3 363 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 EML5Q05BV3 1969 aa12.41□□□□□ -0.42
CTNNA1-205ENST00000517904 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 EXTL3O43909 919 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 JAK2O60674 1132 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 EPN2O95208 641 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 MCF2P10911 925 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 NPTX2P47972 431 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 PEX3P56589 373 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 TNK2Q07912 1038 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 ME3Q16798 604 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 SEZ6Q53EL9 994 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 GAREM2Q75VX8 874 aa12.4□□□□□ -0.42
CTNNA1-205ENST00000517904 DAW1Q8N136 415 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms