RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GUCY1A3Q02108 690 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 RELAQ04206 551 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 EXOSC9Q06265 439 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 BNIP1Q12981 228 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 STK4Q13043 487 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 NR1D2Q14995 579 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 KARSQ15046 597 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 MAPRE2Q15555 327 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TTMPQ5BVD1 217 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CEP78Q5JTW2 689 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 HAUS3Q68CZ6 603 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCTD16Q68DU8 428 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 PPP1R21Q6ZMI0 780 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 BNC2Q6ZN30 1099 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 DGLUCYQ7Z3D6 616 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 NET1Q7Z628 596 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LONP2Q86WA8 852 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SFR1Q86XK3 245 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 MCF2L2Q86YR7 1114 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARHGAP24Q8N264 748 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC35F6Q8N357 371 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCT2Q8NC54 265 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 OR7G1Q8NGA0 311 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LILRB1Q8NHL6 650 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ANGPTL6Q8NI99 470 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LRRC8CQ8TDW0 803 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 DDI1Q8WTU0 396 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 NAT14Q8WUY8 206 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 RIN2Q8WYP3 895 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 EME1Q96AY2 570 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAM136AQ96C01 138 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 RMDN1Q96DB5 314 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LTV1Q96GA3 475 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 HSPA12BQ96MM6 686 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 NAP1L4Q99733 375 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 DNAI2Q9GZS0 605 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 WNT10AQ9GZT5 417 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZCWPW1Q9H0M4 648 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CCDC134Q9H6E4 229 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ECT2Q9H8V3 914 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CARS2Q9HA77 564 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMBIM4Q9HC24 238 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LZTFL1Q9NQ48 299 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TBC1D23Q9NUY8 699 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TYW1Q9NV66 732 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 DDX43Q9NXZ2 648 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ADAM22Q9P0K1 906 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF212Q9UDV6 495 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 DNAJB4Q9UDY4 337 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 XPO7Q9UIA9 1087 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 RABGAP1Q9Y3P9 1069 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRIM17Q9Y577 477 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SBNO1A3KN83 1393 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 JCADQ9P266 1359 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 OVOS2A0A0G2JMS6 1433 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 OVOS2A0A0J9YW53 1432 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 PTPRTO14522 1441 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 OVOS2Q6IE36 1432 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRPM1Q7Z4N2 1603 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 MYO5CQ9NQX4 1742 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CASZ1Q86V15 1759 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 NOTOA8MTQ0 251 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 HAT1O14929 419 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 MCF2LO15068 1137 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 PFDN6O15212 129 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 RNMTO43148 476 aaKnown RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 SULT1B1O43704 296 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 ADCY3O60266 1144 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 GMNNO75496 209 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 FBXO21O94952 628 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 TSPAN15O95858 294 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF865P0CJ78 1059 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 TPBGLP0DKB5 382 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 UBL4AP11441 157 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 PZPP20742 1482 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 DRD4P21917 467 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 PRKACBP22694 351 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 HSPA1LP34931 641 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRT2P35908 639 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 ALDH5A1P51649 535 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 NUP107P57740 925 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 KIF23Q02241 960 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 GUCY2DQ02846 1103 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 RNASELQ05823 741 aaKnown RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 NIPAL4Q0D2K0 466 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 CAMK2GQ13555 558 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 CUL1Q13616 776 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 PTCH1Q13635 1447 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 MRPL58Q14197 206 aaKnown RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 RCN2Q14257 317 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 RRS1Q15050 365 aaKnown RBP5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 INSCQ1MX18 579 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 ANKDD1AQ495B1 522 aa5.1□□□□□ -1.59
HMGB1P19-201ENST00000517578 GALNTL6Q49A17 601 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms