RNA–Protein interactions for RNA: ENST00000517030.1

RNU6-419P-201, Transcript of RNA, U6 small nuclear 419, pseudogene, humanhuman

BASIC

Gene RNU6-419P, Length 63 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-419P-201ENST00000517030 SHHQ15465 462 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 MAP3K11Q16584 847 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 TMEM30BQ3MIR4 351 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 ODF3L2Q3SX64 289 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 LARP7Q4G0J3 582 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 ANO6Q4KMQ2 910 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 WASHC2DQ5SRD0 308 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 MANEAQ5SRI9 462 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 NSUN5P2Q63ZY6 315 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 ANKS6Q68DC2 871 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 GTF2IRD2BQ6EKJ0 949 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 TTLL5Q6EMB2 1281 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SV2BQ7L1I2 683 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 FBXO33Q7Z6M2 555 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 GTF2IRD2Q86UP8 949 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 EPHX4Q8IUS5 362 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 COLGALT2Q8IYK4 626 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SRBD1Q8N5C6 995 aaKnown RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 FANCBQ8NB91 859 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 ZNF248Q8NDW4 579 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 PHF21BQ96EK2 531 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SLC46A1Q96NT5 459 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 FOXN4Q96NZ1 517 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SDHCQ99643 169 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 TUBB6Q9BUF5 446 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 JAM3Q9BX67 310 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SEZ6LQ9BYH1 1024 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 TRIM15Q9C019 465 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 NIF3L1Q9GZT8 377 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SEMA4BQ9NPR2 832 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 UCKL1Q9NWZ5 548 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 SUCOQ9UBS9 1254 aaKnown RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 NOC2LQ9Y3T9 749 aaKnown RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 COL7A1Q02388 2944 aa-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 HELZ2Q9BYK8 2649 aaKnown RBP-0.71□□□□□ -2.52
RNU6-419P-201ENST00000517030 TRGV11A0A075B6L2 103 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 A0A087WZG4 1122 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 A0A1B0GTW7 788 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 RSPH10B2B2RC85 870 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 PROM1O43490 865 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 CNOT3O75175 753 aaKnown RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 URI1O94763 535 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 FAM13AO94988 1023 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 MPIG6BO95866 241 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 SNRNP70P08621 437 aaKnown RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 RSPH10BP0C881 870 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 FGF5P12034 268 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 ACADSP16219 412 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 MGAT1P26572 445 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 CASRP41180 1078 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 GJA8P48165 433 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 CHN2P52757 468 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 P2RX3P56373 397 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 ANTXR2P58335 489 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 HSD11B2P80365 405 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 GRIK2Q13002 908 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 MLECQ14165 292 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 WSCD2Q2TBF2 565 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 TICAM1Q8IUC6 712 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 CCDC103Q8IW40 242 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 SFTPA1Q8IWL2 248 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 LMNTD2Q8IXW0 634 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 ZNF440Q8IYI8 595 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 OR5M3Q8NGP4 307 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 GTF3C2Q8WUA4 911 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 STAG1Q8WVM7 1258 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 HERVK_113Q902F9 699 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 LPIN2Q92539 896 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 RITA1Q96K30 269 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 SF3B5Q9BWJ5 86 aaKnown RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 BCL11AQ9H165 835 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 PDZD7Q9H5P4 517 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 GMIPQ9P107 970 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 USP36Q9P275 1121 aaKnown RBP-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 PI4KBQ9UBF8 816 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 PCDHA2Q9Y5H9 948 aa-0.72□□□□□ -2.52
RNU6-419P-201ENST00000517030 A0A0G2JLM5 398 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 A0A0J9YWU9 116 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 ERVV-1B6SEH8 477 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 FOXN3O00409 490 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 SPTLC2O15270 562 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 XPNPEP2O43895 674 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 WDR47O94967 919 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 FAM163BP0C2L3 166 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 SRGNP10124 158 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 CTSAP10619 480 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 FGFR4P22455 802 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 ECHS1P30084 290 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 IRX1P78414 480 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 KIF5AQ12840 1032 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 MRPL49Q13405 166 aaKnown RBP-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 RBBP5Q15291 538 aaKnown RBP-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 GEN1Q17RS7 908 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 RBM20Q5T481 1227 aaKnown RBP-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 PLA2G4FQ68DD2 849 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 EFCAB12Q6NXP0 572 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 ARHGAP11AQ6P4F7 1023 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 Q6ZR54 194 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 SLC29A4Q7RTT9 530 aa-0.73□□□□□ -2.53
RNU6-419P-201ENST00000517030 KIF18BQ86Y91 864 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms