RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 BMP15O95972 392 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PIGRP01833 764 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PAX3P23760 479 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 AARSP49588 968 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 HAUS6Q7Z4H7 955 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 USP37Q86T82 979 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 IRF7Q92985 503 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PLIN2Q99541 437 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GPR88Q9GZN0 384 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TRPV5Q9NQA5 729 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 HEBP1Q9NRV9 189 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 YIPF1Q9Y548 306 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 WDR87Q6ZQQ6 2873 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 DMDP11532 3685 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GPR179Q6PRD1 2367 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 COL4A2P08572 1712 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 K7ENM7 598 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PSMC3P17980 439 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CD72P21854 359 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GJB2P29033 226 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 UBA7P41226 1012 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CCR2P41597 374 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CSTF1Q05048 431 aaKnown RBP15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GRM2Q14416 872 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZBTB6Q15916 424 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 RNF19BQ6ZMZ0 732 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GPBP1Q86WP2 473 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 E2F7Q96AV8 911 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TMX3Q96JJ7 454 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 REEP2Q9BRK0 252 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 FAM126AQ9BYI3 521 aaPredicted RBP15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 RPF1Q9H9Y2 349 aaKnown RBP15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TRPV4Q9HBA0 871 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PARVGQ9HBI0 331 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PRMT8Q9NR22 394 aaPredicted RBP15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZSCAN32Q9NX65 697 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CEP72Q9P209 647 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CEP250Q9BV73 2442 aa15.88■□□□□ 0.13
SCARNA20.5-201ENST00000516991 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 FAM13AO94988 1023 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MYL4P12829 197 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TYMPP19971 482 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MCM2P49736 904 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZNF131P52739 623 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 EPHB3P54753 998 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MYBPC2Q14324 1141 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ENOX2Q16206 610 aaKnown RBP15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ARSHQ5FYA8 562 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 POTEHQ6S545 545 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 VITQ6UXI7 678 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 DSTYKQ6XUX3 929 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CD302Q8IX05 232 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 KIAA2013Q8IYS2 634 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 HS6ST3Q8IZP7 471 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SUMF1Q8NBK3 374 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ATRIPQ8WXE1 791 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MSANTD3Q96H12 275 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 HAPLN2Q9GZV7 340 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SLITRK6Q9H5Y7 841 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TBX20Q9UMR3 447 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TICRRQ7Z2Z1 1910 aa15.87■□□□□ 0.13
SCARNA20.5-201ENST00000516991 LACTBL1A8MY62 500 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 FAM189A1O60320 539 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TBCAO75347 108 aaKnown RBP15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MOSPD3O75425 235 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 FGF19O95750 216 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ADRB2P07550 413 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ODC1P11926 461 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GDI1P31150 447 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TNFSF9P41273 254 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SPAG1Q07617 926 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 GPR17Q13304 367 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 PPP2R5DQ14738 602 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SPATA1Q5VX52 437 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 OVOS1Q6IE37 1185 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 C1orf228Q6PIY5 440 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MAP4K3Q8IVH8 894 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZBTB44Q8NCP5 570 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 RASSF8Q8NHQ8 419 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZSCAN18Q8TBC5 510 aaPredicted RBP15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 NELL1Q92832 810 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SECISBP2LQ93073 1101 aaKnown RBP15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 CHRDQ9H2X0 955 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZNF334Q9HCZ1 680 aaPredicted RBP15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 NCDNQ9UBB6 729 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 DERAQ9Y315 318 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ASB3Q9Y575 518 aa15.86■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TSC2P49815 1807 aa15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 A0A0B4J269 797 aa15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ZNF263O14978 683 aa15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 KRT18P05783 430 aaKnown RBP15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 LONP1P36776 959 aaKnown RBP15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 ALDH1A3P47895 512 aa15.85■□□□□ 0.13
SCARNA20.5-201ENST00000516991 TEAD2Q15562 447 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms