RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MRPL4Q9BYD3 311 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NFKBIZQ9BYH8 718 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TRIM6Q9C030 488 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BHLHE41Q9C0J9 482 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PRO3102Q9H379 93 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C1orf112Q9NSG2 853 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HOOK1Q9UJC3 728 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TET1Q8NFU7 2136 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PHLPP2Q6ZVD8 1323 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ADGRA3Q8IWK6 1321 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SCN5AQ14524 2016 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A0U1RQF3 1178 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PVALEFA0A1B0GWK0 134 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1W2PPC1 479 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FRMD3A2A2Y4 597 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C9IYK1 514 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PDE2AO00408 941 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ENC1O14682 589 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TSPAN1O60635 241 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PRPF6O94906 941 aaKnown RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NPTXRO95502 500 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYL1P05976 194 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYOGP15173 224 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ETFBP38117 255 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MATR3P43243 847 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SOX9P48436 509 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LIG4P49917 911 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NCKAP1LP55160 1127 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM189BP81408 668 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LMNB2Q03252 620 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 COASYQ13057 564 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM187BQ17R55 369 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZC2HC1CQ53FD0 456 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SNAP47Q5SQN1 464 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ATF7IP2Q5U623 682 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RASIP1Q5U651 963 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM109BQ6ICB4 259 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AGMOQ6ZNB7 445 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM43BQ6ZT52 329 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HFE2Q6ZVN8 426 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 STXBP4Q6ZWJ1 553 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ECHDC2Q86YB7 292 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HERC6Q8IVU3 1022 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SYCP3Q8IZU3 236 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CRIPAKQ8N1N5 446 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GOLM1Q8NBJ4 401 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LINC01599Q8WXQ3 324 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ERCC4Q92889 916 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZBTB45Q96K62 511 aaPredicted RBP6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 YME1L1Q96TA2 773 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ADPGKQ9BRR6 497 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 APOL6Q9BWW8 343 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PBX4Q9BYU1 374 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 IGFLR1Q9H665 355 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LMBRD1Q9NUN5 540 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM105AQ9NUU6 356 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ARHGAP28Q9P2N2 729 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SEL1LQ9UBV2 794 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MSRAQ9UJ68 235 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TBX20Q9UMR3 447 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PCDHB2Q9Y5E7 798 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYH15Q9Y2K3 1946 aa6.34□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MKI67P46013 3256 aaKnown RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ANKRD62A6NC57 917 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HNRNPDLO14979 420 aaKnown RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 N4BP3O15049 544 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLDN3O15551 220 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KLRC4O43908 158 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF623O75123 536 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SMC2O95347 1197 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GJB5O95377 273 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EOMESO95936 686 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RPN1P04843 607 aaKnown RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EDN1P05305 212 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MYBP10242 640 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ITGA4P13612 1032 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TFE3P19532 575 aaPredicted RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ABCD1P33897 745 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 OSTNP61366 133 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GTF2BQ00403 316 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PNOCQ13519 176 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 POSTNQ15063 836 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CAMK4Q16566 473 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LRIT3Q3SXY7 679 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RPS26P11Q5JNZ5 115 aaPredicted RBP6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FAM26FQ5R3K3 315 aa6.33□□□□□ -1.4
SCARNA6.1-201ENST00000516989 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms