RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SLC17A8Q8NDX2 589 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 C1orf162Q8NEQ5 155 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SLC30A5Q8TAD4 765 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TFAP2BQ92481 460 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 JADE3Q92613 823 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 RAB24Q969Q5 203 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FAXDC2Q96IV6 333 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SMOQ99835 787 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TLR10Q9BXR5 811 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 IMPG2Q9BZV3 1241 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ALG13Q9NP73 1137 aaKnown RBP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KMT5AQ9NQR1 393 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 IL17RBQ9NRM6 502 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GNL3LQ9NVN8 582 aaKnown RBP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 LRRC3CA6NJW4 275 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SLC43A1O75387 559 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MT-CO1P00395 513 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ANXA1P04083 346 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CD1AP06126 327 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MYBL2P10244 700 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GATA3P23771 443 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ANXA11P50995 505 aaKnown RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SOX10P56693 466 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KIF23Q02241 960 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ITKQ08881 620 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TARDBPQ13148 414 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 HLXQ14774 488 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PTPRRQ15256 657 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TSTD2Q5T7W7 516 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 RNF187Q5TA31 235 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MICALCLQ6ZW33 695 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ZNF365Q70YC5 407 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PEG10Q86TG7 708 aaKnown RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TTC7BQ86TV6 843 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PNMA8AQ86V59 439 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 IFI44Q8TCB0 444 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CLPTM1LQ96KA5 538 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CALCOCO1Q9P1Z2 691 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FRMD4BQ9Y2L6 1034 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NR2E3Q9Y5X4 410 aa3.78□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ARHGEF17Q96PE2 2063 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CCDC154A6NI56 674 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 E7ENX8 843 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 F5H697 171 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 HTRA2O43464 458 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PROM1O43490 865 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 RBMXL2O75526 392 aaKnown RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CHRM2P08172 466 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GNAI3P08754 354 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SBK3P0C264 359 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CCND1P24385 295 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SMARCA1P28370 1054 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SLC6A4P31645 630 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 IARSP41252 1262 aaKnown RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 MAPK10P53779 464 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 NXPH1P58417 271 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ZNF280AP59817 542 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GNAI1P63096 354 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TAP2Q03519 686 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ITIH3Q06033 890 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SRSF4Q08170 494 aaKnown RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 IL10RAQ13651 578 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 KIAA1614Q5VZ46 1190 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 EGFLAMQ63HQ2 1017 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 KIAA0895LQ68EN5 471 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TSHZ1Q6ZSZ6 1077 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PTF1AQ7RTS3 328 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CFAP52Q8N1V2 620 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 NSUN7Q8NE18 718 aaKnown RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 LPIN2Q92539 896 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 KLHL32Q96NJ5 620 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TRIB1Q96RU8 372 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TIMP4Q99727 224 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 FAM126AQ9BYI3 521 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SLC29A3Q9BZD2 475 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CTTNBP2NLQ9P2B4 639 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ARPP21Q9UBL0 812 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TUBD1Q9UJT1 453 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ATP8A1Q9Y2Q0 1164 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ENTPD2Q9Y5L3 495 aa3.77□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SHTN1A0MZ66 631 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GCOM1H8Y6P7 765 aaPredicted RBP3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 POLRMTO00411 1230 aaKnown RBP3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TRIAP1O43715 76 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SUN1O94901 812 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 TTLL1O95922 423 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PPP3CBP16298 524 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 WT1P19544 449 aaPredicted RBP3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 C5AR1P21730 350 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CYP2C19P33261 490 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ABCG1P45844 678 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GUCY2FP51841 1108 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 POU6F2P78424 691 aaPredicted RBP3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 UAP1L1Q3KQV9 507 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 EPHA10Q5JZY3 1008 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SYDE2Q5VT97 1194 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 EFCAB2Q5VUJ9 269 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SLC30A10Q6XR72 485 aa3.76□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ZNF788Q6ZQV5 615 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms