RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 APTXQ7Z2E3 356 aaKnown RBP7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 TTC39CQ8N584 583 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 COLGALT1Q8NBJ5 622 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 TMEM169Q96HH4 297 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 PCMTD1Q96MG8 357 aaPredicted RBP7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 NAP1L5Q96NT1 182 aaPredicted RBP7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 NT5C1BQ96P26 610 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 NUP58Q9BVL2 599 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 PLVAPQ9BX97 442 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 TRIM5Q9C035 493 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 DNAI2Q9GZS0 605 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 GDAP2Q9NXN4 497 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 IFNKQ9P0W0 207 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 DNAJB4Q9UDY4 337 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 PUF60Q9UHX1 559 aaKnown RBP7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 SIX4Q9UIU6 781 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 DAAM1Q9Y4D1 1078 aa7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 MRPL42Q9Y6G3 142 aaKnown RBP7.6□□□□□ -1.19
SCARNA6-201ENST00000515982 PTPRSQ13332 1948 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 A0A1W2PQC6 194 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 LINC01553A4QN01 128 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 HUS1O60921 280 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 CLSTN1O94985 981 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 VNN1O95497 513 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ASS1P00966 412 aaKnown RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 FOSL2P15408 326 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 TBXAS1P24557 533 aaPredicted RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PON1P27169 355 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 AARSP49588 968 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ERVK-21P61565 698 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 YWHAEP62258 255 aaKnown RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 TNNC1P63316 161 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 GSE1Q14687 1217 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ZNF699Q32M78 642 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 WDR72Q3MJ13 1102 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 TJAP1Q5JTD0 557 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PDXDC1Q6P996 788 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ENOSF1Q7L5Y1 443 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 METTL23Q86XA0 190 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SLC39A11Q8N1S5 342 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 APPL2Q8NEU8 664 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 CXorf38Q8TB03 319 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SPATA18Q8TC71 538 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 TAS1R2Q8TE23 839 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SEMA4DQ92854 862 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 IQCDQ96DY2 449 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 FAM122AQ96E09 287 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 IGSF21Q96ID5 467 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ERGIC2Q96RQ1 377 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 TGS1Q96RS0 853 aaKnown RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 CRACR2AQ9BSW2 395 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PBX4Q9BYU1 374 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 XPO4Q9C0E2 1151 aaKnown RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 INTS2Q9H0H0 1204 aaKnown RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 FAM124BQ9H5Z6 455 aaPredicted RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SLC28A3Q9HAS3 691 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 CYP3A43Q9HB55 503 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PLCB1Q9NQ66 1216 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 GCNT4Q9P109 453 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 ADAM28Q9UKQ2 775 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 DSEQ9UL01 958 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SSX2IPQ9Y2D8 614 aa7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 PRG3Q9Y2Y8 225 aaPredicted RBP7.59□□□□□ -1.19
SCARNA6-201ENST00000515982 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 COL4A6Q14031 1691 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 FSD2A1L4K1 749 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 LCHNA4D1U4 455 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 NT5C1B-RDH14C9J2C7 533 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 C5orf67F2Z3F1 127 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 M0QZQ0 153 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 CYB561D2O14569 222 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 SYN3O14994 580 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TEX33O43247 280 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 FGF18O76093 207 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 KIF4AO95239 1232 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 CA3P07451 260 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 ODC1P11926 461 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 MYOGP15173 224 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TRIM21P19474 475 aaKnown RBP7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 SLC9A1P19634 815 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TYMPP19971 482 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 RFX1P22670 979 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 CTNNB1P35222 781 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 MRE11P49959 708 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 MFAP3P55082 362 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 NOP14P78316 857 aaKnown RBP7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TAP1Q03518 808 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 UBE3AQ05086 875 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 KCNMA1Q12791 1236 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 SYCP1Q15431 976 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TIGD5Q53EQ6 642 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 FUT10Q6P4F1 479 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 TRIM65Q6PJ69 517 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 CD300LGQ6UXG3 332 aa7.58□□□□□ -1.2
SCARNA6-201ENST00000515982 DDX53Q86TM3 631 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms