RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 IL18RAPO95256 599 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 SEC24AO95486 1093 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 NFICP08651 508 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 NPR3P17342 541 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 TYMPP19971 482 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 LILRA4P59901 499 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 PLD1Q13393 1074 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 L1TD1Q5T7N2 865 aaKnown RBP14.81□□□□□ -0.04
TCOF1-215ENST00000515516 C9orf57Q5W0N0 161 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 CWF19L1Q69YN2 538 aaKnown RBP14.81□□□□□ -0.04
TCOF1-215ENST00000515516 OVOS1Q6IE37 1185 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 STXBP4Q6ZWJ1 553 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 PDZD4Q76G19 769 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-215ENST00000515516 METTL23Q86XA0 190 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 CCDC65Q8IXS2 484 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 PDILTQ8N807 584 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 LINC00301Q8NCQ3 95 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 GPR152Q8TDT2 470 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 FGF14Q92915 247 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 DNAJC19Q96DA6 116 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 MCRS1Q96EZ8 462 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 SHDQ96IW2 340 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 AVENQ9NQS1 362 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-215ENST00000515516 SLC2A4RGQ9NR83 387 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 C2CD2Q9Y426 696 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 MUC6Q6W4X9 2439 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 TISP43B9A030 160 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 LDHAP00338 332 aaKnown RBP14.8□□□□□ -0.04
TCOF1-215ENST00000515516 AARSP49588 968 aaKnown RBP eCLIP14.8□□□□□ -0.042e-6■■■□□ 15.7
TCOF1-215ENST00000515516 AMPD3Q01432 767 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 PFKPQ01813 784 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 TWF1Q12792 350 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 FOXD4L5Q5VV16 416 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-215ENST00000515516 RNF19BQ6ZMZ0 732 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 NPAS3Q8IXF0 933 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 TMEM130Q8N3G9 435 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 LEMD2Q8NC56 503 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 FOXD4L4Q8WXT5 416 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-215ENST00000515516 SENP8Q96LD8 212 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 FAM213AQ9BRX8 229 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 ARHGEF3Q9NR81 526 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 OLFML3Q9NRN5 406 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 DPP3Q9NY33 737 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 DSEQ9UL01 958 aa14.8□□□□□ -0.04
TCOF1-215ENST00000515516 KRBA1A5PL33 1030 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 CUTAO60888 179 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 PPP1R37O75864 691 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 MICAL2O94851 1124 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 YEATS4O95619 227 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 ALDH1A3P47895 512 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 EPHB3P54753 998 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 GPC5P78333 572 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 MYBPC2Q14324 1141 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 DENND4AQ7Z401 1863 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 PGLYRP2Q96PD5 576 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 KXD1Q9BQD3 176 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 RPP25Q9BUL9 199 aaKnown RBP14.79□□□□□ -0.04
TCOF1-215ENST00000515516 TNMDQ9H2S6 317 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 CUEDC2Q9H467 287 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 TBC1D17Q9HA65 648 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 ASAH2Q9NR71 780 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 FAM86C1Q9NVL1 165 aa14.79□□□□□ -0.04
TCOF1-215ENST00000515516 A0A087X0B3 334 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 PIRO00625 290 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 CYB561D2O14569 222 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 PPEF2O14830 753 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 PI15O43692 258 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 ECI2O75521 394 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 OR4Q2P0C623 313 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 MYL4P12829 197 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 CEBPBP17676 345 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 GARTP22102 1010 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 ADSSP30520 456 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 TAF6P49848 677 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 GPR17Q13304 367 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 SLC5A9Q2M3M2 681 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 PHLDB3Q6NSJ2 640 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 IQUBQ8NA54 791 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 DTWD2Q8NBA8 298 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 NOC3LQ8WTT2 800 aaKnown RBP14.78□□□□□ -0.04
TCOF1-215ENST00000515516 CACTINQ8WUQ7 758 aaKnown RBP14.78□□□□□ -0.04
TCOF1-215ENST00000515516 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 STRA6Q9BX79 667 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 SIT1Q9Y3P8 196 aa14.78□□□□□ -0.04
TCOF1-215ENST00000515516 R3HCC1Q9Y3T6 440 aaKnown RBP14.78□□□□□ -0.04
TCOF1-215ENST00000515516 FRMD3A2A2Y4 597 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-215ENST00000515516 PNPLA4P41247 253 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 TFAMQ00059 246 aaKnown RBP14.77□□□□□ -0.05
TCOF1-215ENST00000515516 KCNA1Q09470 495 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 DUSP4Q13115 394 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.05
TCOF1-215ENST00000515516 FOXD4L6Q3SYB3 417 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-215ENST00000515516 SV2CQ496J9 727 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 SLC44A4Q53GD3 710 aa14.77□□□□□ -0.05
TCOF1-215ENST00000515516 PRSS36Q5K4E3 855 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms