RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 MAN2B1O00754 1011 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 CLDN3O15551 220 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 OAZ2O95190 189 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 PSMC3P17980 439 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 SLC12A3P55017 1021 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 MTAPQ13126 283 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 ZBTB6Q15916 424 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 RILPL1Q5EBL4 403 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 RNF19BQ6ZMZ0 732 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 MAMSTRQ6ZN01 415 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 DEPDC1BQ8WUY9 529 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 ZNF512Q96ME7 567 aaPredicted RBP20.05■□□□□ 0.8
SPOP-220ENST00000515508 ZSWIM3Q96MP5 696 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 IER2Q9BTL4 223 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 OXCT2Q9BYC2 517 aaPredicted RBP20.05■□□□□ 0.8
SPOP-220ENST00000515508 FAM126AQ9BYI3 521 aaPredicted RBP20.05■□□□□ 0.8
SPOP-220ENST00000515508 CHRDQ9H2X0 955 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 ZNF334Q9HCZ1 680 aaPredicted RBP20.05■□□□□ 0.8
SPOP-220ENST00000515508 ASAH2Q9NR71 780 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 YIPF1Q9Y548 306 aa20.05■□□□□ 0.8
SPOP-220ENST00000515508 MED19A0JLT2 244 aaPredicted RBP20.04■□□□□ 0.8
SPOP-220ENST00000515508 VNN2O95498 520 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 CLTAP09496 248 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 TDGF1P13385 188 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 CYP3A5P20815 502 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 NCKAP1LP55160 1127 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 YWHAHQ04917 246 aaPredicted RBP20.04■□□□□ 0.8
SPOP-220ENST00000515508 TMEM130Q8N3G9 435 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 NCDNQ9UBB6 729 aa20.04■□□□□ 0.8
SPOP-220ENST00000515508 SMG5Q9UPR3 1016 aaKnown RBP20.04■□□□□ 0.8
SPOP-220ENST00000515508 NCANO14594 1321 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 NUP210Q8TEM1 1887 aaPredicted RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 H0YCG3 227 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 ARNTLO00327 626 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 MYL4P12829 197 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 MARCKSP29966 332 aaPredicted RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 GDI1P31150 447 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 ZRSR1Q15695 479 aaKnown RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 TMEM119Q4V9L6 283 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 TSSK4Q6SA08 328 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 ZSCAN18Q8TBC5 510 aaPredicted RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 LARSQ9P2J5 1176 aaKnown RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 UBQLN1Q9UMX0 589 aaKnown RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 NDRG2Q9UN36 371 aaKnown RBP20.03■□□□□ 0.8
SPOP-220ENST00000515508 KIF3AQ9Y496 699 aa20.03■□□□□ 0.8
SPOP-220ENST00000515508 FAM189A1O60320 539 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 PLA2G4BP0C869 781 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 VIPR2P41587 438 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 PPP2R3AQ06190 1150 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 SPAG1Q07617 926 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 PLD1Q13393 1074 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 TMC8Q8IU68 726 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 MFSD6LQ8IWD5 586 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 GPR161Q8N6U8 529 aaKnown RBP20.02■□□□□ 0.8
SPOP-220ENST00000515508 SHKBP1Q8TBC3 707 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 KIF12Q96FN5 646 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 LRRC3Q9BY71 257 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 GPR88Q9GZN0 384 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 ODF2LQ9ULJ1 636 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 TIMM13Q9Y5L4 95 aaPredicted RBP20.02■□□□□ 0.8
SPOP-220ENST00000515508 PIAS3Q9Y6X2 628 aa20.02■□□□□ 0.8
SPOP-220ENST00000515508 VWA3AA6NCI4 1184 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 ADRB2P07550 413 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 OR4Q2P0C623 313 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 GJA1P17302 382 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 SCP2P22307 547 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 TNFSF9P41273 254 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 MATR3P43243 847 aaKnown RBP eCLIP20.01■□□□□ 0.79
SPOP-220ENST00000515508 MLLT6P55198 1093 aaPredicted RBP20.01■□□□□ 0.79
SPOP-220ENST00000515508 GPR17Q13304 367 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 TEAD2Q15562 447 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 KYAT1Q16773 422 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
SPOP-220ENST00000515508 HAUS6Q7Z4H7 955 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 FAM3CQ92520 227 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 E2F7Q96AV8 911 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 BICD1Q96G01 975 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 CDK5RAP3Q96JB5 506 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 TSPAN18Q96SJ8 248 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 PLIN2Q99541 437 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 CRISPLD1Q9H336 500 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 ANK1P16157 1881 aa20.01■□□□□ 0.79
SPOP-220ENST00000515508 NPHP3-ACAD11A0A0J9YXS1 232 aa20■□□□□ 0.79
SPOP-220ENST00000515508 OR6C75A6NL08 312 aa20■□□□□ 0.79
SPOP-220ENST00000515508 XPOTO43592 962 aaKnown RBP20■□□□□ 0.79
SPOP-220ENST00000515508 PIGRP01833 764 aa20■□□□□ 0.79
SPOP-220ENST00000515508 CACNB1Q02641 598 aaPredicted RBP20■□□□□ 0.79
SPOP-220ENST00000515508 ENOX2Q16206 610 aaKnown RBP20■□□□□ 0.79
SPOP-220ENST00000515508 RSPO4Q2I0M5 234 aaPredicted RBP20■□□□□ 0.79
SPOP-220ENST00000515508 MCTP1Q6DN14 999 aa20■□□□□ 0.79
SPOP-220ENST00000515508 SECISBP2LQ93073 1101 aaKnown RBP20■□□□□ 0.79
SPOP-220ENST00000515508 MSANTD3Q96H12 275 aa20■□□□□ 0.79
SPOP-220ENST00000515508 A0A1W2PRU2 124 aa19.99■□□□□ 0.79
SPOP-220ENST00000515508 HEPACAM2A8MVW5 462 aa19.99■□□□□ 0.79
SPOP-220ENST00000515508 LACTBL1A8MY62 500 aa19.99■□□□□ 0.79
SPOP-220ENST00000515508 ZNF263O14978 683 aa19.99■□□□□ 0.79
SPOP-220ENST00000515508 HNRNPDLO14979 420 aaKnown RBP19.99■□□□□ 0.79
SPOP-220ENST00000515508 OGTO15294 1046 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms