RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NAA30Q147X3 362 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PTPROQ16827 1216 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 C2CD6Q53TS8 623 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF667Q5HYK9 610 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 C10orf76Q5T2E6 689 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PHLDB2Q86SQ0 1253 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 UBR7Q8N806 425 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CPA5Q8WXQ8 436 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ARHGEF26Q96DR7 871 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 FAM81BQ96LP2 452 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 NAPGQ99747 312 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 SMYD3Q9H7B4 428 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 OSGEPQ9NPF4 335 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CACNG4Q9UBN1 327 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CNTN6Q9UQ52 1028 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ARVCFO00192 962 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 GPR182O15218 404 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 THAP12O43422 761 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PALMO75781 387 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 GNA15P30679 374 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PAK2Q13177 524 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CD302Q8IX05 232 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 SLC43A3Q8NBI5 491 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 RNF169Q8NCN4 708 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 SLC35G2Q8TBE7 412 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CYFIP2Q96F07 1278 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 NOX5Q96PH1 765 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 MMS19Q96T76 1030 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ZSWIM1Q9BR11 485 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 L2HGDHQ9H9P8 463 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ERVK-5Q9HDB9 667 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PAK6Q9NQU5 681 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 FAM105AQ9NUU6 356 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 MIOSQ9NXC5 875 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CNTN3Q9P232 1028 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 A0A0U1RQG5 324 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 RTN2O75298 545 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TACC1O75410 805 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 FTCDO95954 541 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF132P52740 706 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 BPIFB4P59827 614 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 PTPN11Q06124 597 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 RNF10Q8N5U6 811 aaKnown RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TRIM58Q8NG06 486 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF606Q8WXB4 792 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TFAP2BQ92481 460 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 RABGGTAQ92696 567 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TAF4BQ92750 862 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TWNKQ96RR1 684 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 GAD1Q99259 594 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 PSMB7Q99436 277 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 ADAM2Q99965 735 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 ISCUQ9H1K1 167 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 PDCL3Q9H2J4 239 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 HMGXB4Q9UGU5 601 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 PACSIN2Q9UNF0 486 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 COG5Q9UP83 839 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 V9GYY5 206 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 TET1Q8NFU7 2136 aa9.78□□□□□ -0.84
CPNE4-213ENST00000515418 PDCD11Q14690 1871 aaKnown RBP9.78□□□□□ -0.84
CPNE4-213ENST00000515418 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 GRID2IPA4D2P6 1211 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 ANKRD62A6NC57 917 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 PTGESO14684 152 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF185O15231 689 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 UQCRHP07919 91 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 TMEM253P0C7T8 217 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 ATICP31939 592 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 CXCR5P32302 372 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 CDK7P50613 346 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 DNA2P51530 1060 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.84
CPNE4-213ENST00000515418 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 FAM26DQ5JW98 314 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 NAA35Q5VZE5 725 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 C9orf57Q5W0N0 161 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 LLGL2Q6P1M3 1020 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 AGMOQ6ZNB7 445 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 RTN4RL1Q86UN2 441 aaPredicted RBP9.77□□□□□ -0.84
CPNE4-213ENST00000515418 NT5DC4Q86YG4 428 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 TXLNBQ8N3L3 684 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 DNAJC5GQ8N7S2 189 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 GSTCDQ8NEC7 633 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 BEST2Q8NFU1 509 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 WHAMMQ8TF30 809 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.84
CPNE4-213ENST00000515418 CARD6Q9BX69 1037 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 BCO2Q9BYV7 579 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms