RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
SMAD1-215ENST00000515385 TBCCQ15814 346 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 PKN2Q16513 984 aaKnown RBP13.53□□□□□ -0.24
SMAD1-215ENST00000515385 MAPK6Q16659 721 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 IZUMO3Q5VZ72 239 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 EXOC8Q8IYI6 725 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 PIGSQ96S52 555 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 RBM15Q96T37 977 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMAD1-215ENST00000515385 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
SMAD1-215ENST00000515385 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 PSMC3IPQ9P2W1 217 aaPredicted RBP13.53□□□□□ -0.24
SMAD1-215ENST00000515385 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 STX8Q9UNK0 236 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 NEU2Q9Y3R4 380 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
SMAD1-215ENST00000515385 A0A0G2JND7 137 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 USP17L3A6NCW0 530 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 USP17L4A6NCW7 530 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 HARSP12081 509 aaKnown RBP13.52□□□□□ -0.24
SMAD1-215ENST00000515385 GYG1P46976 350 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 OLFML2BQ68BL8 750 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 CENPUQ71F23 418 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 USP17L1Q7RTZ2 530 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 ZNF564Q8TBZ8 553 aaPredicted RBP13.52□□□□□ -0.24
SMAD1-215ENST00000515385 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.24
SMAD1-215ENST00000515385 ZFRQ96KR1 1074 aaKnown RBP13.52□□□□□ -0.24
SMAD1-215ENST00000515385 BTBD9Q96Q07 612 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 TMEM120AQ9BXJ8 343 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 MANSC1Q9H8J5 431 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 BTBD7Q9P203 1132 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 NUMBLQ9Y6R0 609 aa13.52□□□□□ -0.24
SMAD1-215ENST00000515385 B2RBV5 119 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMAD1-215ENST00000515385 BAG2O95816 211 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 GAP43P17677 238 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 SLC1A1P43005 524 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 CD97P48960 835 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 GEMIN4P57678 1058 aaKnown RBP13.52□□□□□ -0.25
SMAD1-215ENST00000515385 DDB1Q16531 1140 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 C1orf228Q6PIY5 440 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 SATL1Q86VE3 508 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 C4orf33Q8N1A6 199 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 FAM172AQ8WUF8 416 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 PRICKLE1Q96MT3 831 aaPredicted RBP13.52□□□□□ -0.25
SMAD1-215ENST00000515385 TSSK1BQ9BXA7 367 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.25
SMAD1-215ENST00000515385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 PIK3CDO00329 1044 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 EML1O00423 815 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 USP17L8P0C7I0 530 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 PLS3P13797 630 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 GRIA2P42262 883 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 TNNI2P48788 182 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 GPSM2P81274 684 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CCNG2Q16589 344 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CYP4F22Q6NT55 531 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 OXNAD1Q96HP4 312 aaPredicted RBP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 C1orf21Q9H246 121 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CHST7Q9NS84 486 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CLIC5Q9NZA1 410 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 GTF3C4Q9UKN8 822 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 SPECC1L-ADORA2AF8WAN1 911 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 FOXN3O00409 490 aaPredicted RBP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 FCHO1O14526 889 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 PEX1O43933 1283 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 VCLP18206 1134 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 RRM1P23921 792 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 RAB15P59190 212 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 MYL7Q01449 175 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 P3H1Q32P28 736 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 DHDDSQ86SQ9 333 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 CHSY1Q86X52 802 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 ULK2Q8IYT8 1036 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms