RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 NIF3L1Q9GZT8 377 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 AGTPBP1Q9UPW5 1226 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 UMODL1Q5DID0 1318 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 OTOFQ9HC10 1997 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 RGS16O15492 202 aaPredicted RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 FAM189A1O60320 539 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 NF2P35240 595 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 TRPC3Q13507 836 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 SLC29A2Q14542 456 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 LRRC38Q5VT99 294 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 TSHZ1Q6ZSZ6 1077 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ANKRD13AQ8IZ07 590 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ZNF473Q8WTR7 871 aaKnown RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 RBM41Q96IZ5 413 aaKnown RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 FOXP3Q9BZS1 431 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 SMARCAD1Q9H4L7 1026 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ASIC3Q9UHC3 531 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 CPSF3Q9UKF6 684 aaKnown RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 PTPN22Q9Y2R2 807 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 SPDYE5A6NIY4 337 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 E7EVH7 732 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 NDC80O14777 642 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
NUP54-217ENST00000514987 RIPK2O43353 540 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 TRAPPC3O43617 180 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 CAND2O75155 1236 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 KIAA0754O94854 1291 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 IL18RAPO95256 599 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 CALCAP01258 141 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 TNNC2P02585 160 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 HARSP12081 509 aaKnown RBP15.78■□□□□ 0.12
NUP54-217ENST00000514987 OSBPP22059 807 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 KCNJ1P48048 391 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 COPS2P61201 443 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 KCTD2Q14681 263 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 LY6KQ17RY6 165 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 MPZL3Q6UWV2 235 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 MMS22LQ6ZRQ5 1243 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 YTHDF3Q7Z739 585 aaKnown RBP15.78■□□□□ 0.12
NUP54-217ENST00000514987 CCDC50Q8IVM0 306 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
NUP54-217ENST00000514987 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 CCHCR1Q8TD31 782 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 C1orf54Q8WWF1 131 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 OSBPL8Q9BZF1 889 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 MROH8Q9H579 483 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 PCDHGC3Q9UN70 934 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 KCNH4Q9UQ05 1017 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 CEP83Q9Y592 693 aa15.78■□□□□ 0.12
NUP54-217ENST00000514987 DNAJC25-GNG10A0A024R161 153 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 ACKR2O00590 384 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 HBP1O60381 514 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 CNMDO75829 334 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 EDN1P05305 212 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 SRGAP2CP0DJJ0 459 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 ATF2P15336 505 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 EIF4BP23588 611 aaKnown RBP15.77■□□□□ 0.11
NUP54-217ENST00000514987 KLF1Q13351 362 aaPredicted RBP15.77■□□□□ 0.11
NUP54-217ENST00000514987 PPIL2Q13356 520 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 R3HDM1Q15032 1099 aaKnown RBP15.77■□□□□ 0.11
NUP54-217ENST00000514987 MFSD5Q6N075 450 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 TAOK1Q7L7X3 1001 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.11
NUP54-217ENST00000514987 ZBTB33Q86T24 672 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 PASD1Q8IV76 773 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 C10orf67Q8IYJ2 551 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 RNF149Q8NC42 400 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 ANKRD36BP1Q96IX9 119 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 FAM84AQ96KN4 292 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 SCLT1Q96NL6 688 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 TRAIPQ9BWF2 469 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 TRIM7Q9C029 511 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 SEMA4AQ9H3S1 761 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 ELP3Q9H9T3 547 aa15.77■□□□□ 0.11
NUP54-217ENST00000514987 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 SOCS7O14512 581 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 B4GALT4O60513 344 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 SHBGP04278 402 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 PROZP22891 400 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 ATP5DP30049 168 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 CDH5P33151 784 aaPredicted RBP15.76■□□□□ 0.11
NUP54-217ENST00000514987 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
NUP54-217ENST00000514987 POU5F1BQ06416 359 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 SNX1Q13596 522 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 PIGHQ14442 188 aaPredicted RBP15.76■□□□□ 0.11
NUP54-217ENST00000514987 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 RHBDF2Q6PJF5 856 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 MMP19Q99542 508 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 NFKBIZQ9BYH8 718 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 FZD8Q9H461 694 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 CISHQ9NSE2 258 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 ANAPC5Q9UJX4 755 aa15.76■□□□□ 0.11
NUP54-217ENST00000514987 STRIP2Q9ULQ0 834 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms