RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CNOT1A5YKK6 2376 aaKnown RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 SDK1Q7Z5N4 2213 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 TM4SF5O14894 197 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 FOXD2O60548 495 aaPredicted RBP22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 RPA1P27694 616 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 C12orf50Q8NA57 414 aaPredicted RBP22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 LEMD2Q8NC56 503 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 E2F7Q96AV8 911 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 SUSD3Q96L08 255 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 TBC1D32Q96NH3 1257 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 PGLYRP2Q96PD5 576 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 TARS2Q9BW92 718 aaKnown RBP22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 LRRC3Q9BY71 257 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 GPR88Q9GZN0 384 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 PTPRHQ9HD43 1115 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 YIPF1Q9Y548 306 aa22.24■■□□□ 1.15
SQSTM1-215ENST00000514093 MYBPHLA2RUH7 354 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 CCDC169A6NNP5 214 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 MEFVO15553 781 aaPredicted RBP22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 OR4Q2P0C623 313 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 HARSP12081 509 aaKnown RBP22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 KCNE1P15382 129 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 CTHP32929 405 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 RPL9P32969 192 aaKnown RBP22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 FCHO2Q0JRZ9 810 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 ECM1Q16610 540 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 DGKKQ5KSL6 1271 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 WDR5BQ86VZ2 330 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 TMC8Q8IU68 726 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 ARID3BQ8IVW6 561 aaPredicted RBP22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 APPL2Q8NEU8 664 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 FAM200AQ8TCP9 573 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 MSANTD3Q96H12 275 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 ACAP3Q96P50 834 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 CRISPLD1Q9H336 500 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 SMOC1Q9H4F8 434 aa22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 TIMM13Q9Y5L4 95 aaPredicted RBP22.23■■□□□ 1.15
SQSTM1-215ENST00000514093 EXTL3O43909 919 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 VNN2O95498 520 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 ERMNQ8TAM6 284 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 KIFAP3Q92845 792 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 TCHPQ9BT92 498 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 DNAJC25Q9H1X3 360 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 BHMT2Q9H2M3 363 aa22.22■■□□□ 1.15
SQSTM1-215ENST00000514093 ZNF806P0C7X5 589 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 MARCKSP29966 332 aaPredicted RBP22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 LIMK1P53667 647 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 PEX3P56589 373 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 DUSP4Q13115 394 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 SEZ6Q53EL9 994 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 STPG1Q5TH74 334 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 PKN3Q6P5Z2 889 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 C1orf228Q6PIY5 440 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 RALGPS2Q86X27 583 aaPredicted RBP22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 CNTN3Q9P232 1028 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 MAFFQ9ULX9 164 aa22.21■■□□□ 1.15
SQSTM1-215ENST00000514093 EPB41L2O43491 1005 aaKnown RBP22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 NPTX2P47972 431 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 SHC2P98077 582 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 TNK2Q07912 1038 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 CCINQ13939 588 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 ZNF174Q15697 407 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 TAS1R3Q7RTX0 852 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 KBTBD6Q86V97 674 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 ZBTB45Q96K62 511 aaPredicted RBP22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 MKNK1Q9BUB5 465 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 MRPL4Q9BYD3 311 aaKnown RBP22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 TUBGCP4Q9UGJ1 667 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 PCDHB8Q9UN66 801 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 SLC27A5Q9Y2P5 690 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 FRYQ5TBA9 3013 aa22.2■■□□□ 1.14
SQSTM1-215ENST00000514093 DPYSL4O14531 572 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 JAK2O60674 1132 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 LARGE1O95461 756 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 MCF2P10911 925 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 HOXA6P31267 233 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 CCT6AP40227 531 aaKnown RBP22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 SPAG1Q07617 926 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 GAB3Q8WWW8 586 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 ATXN3LQ9H3M9 355 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 PHLPP2Q6ZVD8 1323 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 GREB1Q4ZG55 1949 aa22.19■■□□□ 1.14
SQSTM1-215ENST00000514093 ABLIM1O14639 778 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 RPP40O75818 363 aaKnown RBP22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 EPN2O95208 641 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 KCNK5O95279 499 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 OR52Z1P0C646 297 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 EPHB3P54753 998 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 YWHAHQ04917 246 aaPredicted RBP22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 TRIM29Q14134 588 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 SLC10A6Q3KNW5 377 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 ARHGAP29Q52LW3 1261 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 GAREM2Q75VX8 874 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 CACNA2D4Q7Z3S7 1137 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 BEST2Q8NFU1 509 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 TMEM134Q9H6X4 195 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 KIAA1024Q9UPX6 916 aa22.18■■□□□ 1.14
SQSTM1-215ENST00000514093 SOAT2O75908 522 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 CCDC192P0DO97 292 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms