RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 WNT8AQ9H1J5 351 aa15.95■□□□□ 0.14
VCAN-211ENST00000513984 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 CCDC188H7C350 402 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 MYL3P08590 195 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 DARSP14868 501 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 CD58P19256 250 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 FGFR4P22455 802 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 HOXA11P31270 313 aaPredicted RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 ATICP31939 592 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 BEX3Q00994 111 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 TMEM62Q0P6H9 643 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 TMEM132DQ14C87 1099 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 ZNF667Q5HYK9 610 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 CD302Q8IX05 232 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 UBL4BQ8N7F7 174 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 ALG3Q92685 438 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 ABT1Q9ULW3 272 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 TMEM110-MUSTN1A8MSY1 372 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 DUSP11O75319 330 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 ZMYND10O75800 440 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 LSM8O95777 96 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 ITGB3P05106 788 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 KRT19P08727 400 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 RRM1P23921 792 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 CTNNA2P26232 953 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 PURAQ00577 322 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 CLUL1Q15846 466 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 SCARA5Q6ZMJ2 495 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 HDXQ7Z353 690 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 RNPC3Q96LT9 517 aaKnown RBP15.94■□□□□ 0.14
VCAN-211ENST00000513984 ZIC5Q96T25 663 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 KRT12Q99456 494 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 OSMRQ99650 979 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 CDHR5Q9HBB8 845 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 POLIQ9UNA4 740 aa15.94■□□□□ 0.14
VCAN-211ENST00000513984 WEE2P0C1S8 567 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 MYBL2P10244 700 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 CTNNA1P35221 906 aaKnown RBP15.93■□□□□ 0.14
VCAN-211ENST00000513984 PEX5P50542 639 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 FCGRTP55899 365 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 SLC7A5Q01650 507 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
VCAN-211ENST00000513984 PTP4A2Q12974 167 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 LIN9Q5TKA1 542 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 NOTUMQ6P988 496 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 PASD1Q8IV76 773 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 TRPV1Q8NER1 839 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 PPP1R13LQ8WUF5 828 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 KRT35Q92764 455 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 BTBD6Q96KE9 485 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 NAP1L3Q99457 506 aaPredicted RBP15.93■□□□□ 0.14
VCAN-211ENST00000513984 PLEKHA5Q9HAU0 1116 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 ITGA11Q9UKX5 1188 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 PCDHGC3Q9UN70 934 aa15.93■□□□□ 0.14
VCAN-211ENST00000513984 CCDC66A2RUB6 948 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 KRIT1O00522 736 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 TREHO43280 583 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 NPTXRO95502 500 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 STAU1O95793 577 aaKnown RBP15.92■□□□□ 0.14
VCAN-211ENST00000513984 CYBAP13498 195 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 EIF4BP23588 611 aaKnown RBP15.92■□□□□ 0.14
VCAN-211ENST00000513984 AXLP30530 894 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 CDH5P33151 784 aaPredicted RBP15.92■□□□□ 0.14
VCAN-211ENST00000513984 PLA2G4AP47712 749 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 WDR72Q3MJ13 1102 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 DNAJB3Q8WWF6 145 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 C11orf70Q9BRQ4 267 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 ZNF518BQ9C0D4 1074 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 ADAM22Q9P0K1 906 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 NXF1Q9UBU9 619 aaKnown RBP15.92■□□□□ 0.14
VCAN-211ENST00000513984 ANAPC7Q9UJX3 599 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 GINS2Q9Y248 185 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 DERAQ9Y315 318 aa15.92■□□□□ 0.14
VCAN-211ENST00000513984 C17orf102A2RUQ5 167 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SPOPO43791 374 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 KPNA6O60684 536 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 FGGP02679 453 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 MARCKSL1P49006 195 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 MRPS25P82663 173 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 PLEKHA7Q6IQ23 1121 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 AENQ8WTP8 325 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 AP1M1Q9BXS5 423 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 UBXN6Q9BZV1 441 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 FAM124BQ9H5Z6 455 aaPredicted RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 CYP3A43Q9HB55 503 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 PCDHA3Q9Y5H8 950 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SCINQ9Y6U3 715 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 TMEM88BA6NKF7 163 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 RAD51CO43502 376 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 HEXIM1O94992 359 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 ALDH1A1P00352 501 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 GLI1P08151 1106 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 PAEPP09466 180 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 GNAT1P11488 350 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 MMP8P22894 467 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms