RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TXKP42681 527 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
SPCS3-204ENST00000513139 ARPP19P56211 112 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 SOX4Q06945 474 aaPredicted RBP15.26■□□□□ 0.03
SPCS3-204ENST00000513139 STK3Q13188 491 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 SF3A2Q15428 464 aaKnown RBP15.26■□□□□ 0.03
SPCS3-204ENST00000513139 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 STPG1Q5TH74 334 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 Q6ZS52 159 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 NACC1Q96RE7 527 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
SPCS3-204ENST00000513139 ARRDC1-AS1Q9H2J1 176 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 SPECC1L-ADORA2AF8WAN1 911 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 PODXLO00592 558 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 EPN2O95208 641 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CYP11B2P19099 503 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CTHP32929 405 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 GRM5P41594 1212 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
SPCS3-204ENST00000513139 TWF1Q12792 350 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CCINQ13939 588 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 TEAD2Q15562 447 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CTXN3Q4LDR2 81 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 NT5DC1Q5TFE4 455 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CACNA2D4Q7Z3S7 1137 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 FAM200AQ8TCP9 573 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 GAB3Q8WWW8 586 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 SUSD3Q96L08 255 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 MTMR9Q96QG7 549 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 TM6SF1Q9BZW5 370 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
SPCS3-204ENST00000513139 GJB4Q9NTQ9 266 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 RALYQ9UKM9 306 aaKnown RBP15.25■□□□□ 0.03
SPCS3-204ENST00000513139 TNFSF13BQ9Y275 285 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 PCDHGA5Q9Y5G8 931 aa15.25■□□□□ 0.03
SPCS3-204ENST00000513139 DSPP15924 2871 aaKnown RBP15.25■□□□□ 0.03
SPCS3-204ENST00000513139 PKD1L2Q7Z442 2459 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 DMXL2Q8TDJ6 3036 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 SLC38A8A6NNN8 435 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 AXIN1O15169 862 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
SPCS3-204ENST00000513139 NEMFO60524 1076 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 AKAP3O75969 853 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 KCNK5O95279 499 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 KCNE1P15382 129 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 GJA1P17302 382 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 LIG1P18858 919 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 KRT2P35908 639 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 NR5A1Q13285 461 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 COL9A2Q14055 689 aaPredicted RBP15.24■□□□□ 0.03
SPCS3-204ENST00000513139 ARHGAP29Q52LW3 1261 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 PLA2G2CQ5R387 149 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 ZNF280DQ6N043 979 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 PADI6Q6TGC4 694 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 SHKBP1Q8TBC3 707 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
SPCS3-204ENST00000513139 POLR3CQ9BUI4 534 aaPredicted RBP15.24■□□□□ 0.03
SPCS3-204ENST00000513139 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
SPCS3-204ENST00000513139 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 RXFP3Q9NSD7 469 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 C2orf42Q9NWW7 574 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
SPCS3-204ENST00000513139 WDFY3Q8IZQ1 3526 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 RPP40O75818 363 aaKnown RBP15.23■□□□□ 0.03
SPCS3-204ENST00000513139 SOX9P48436 509 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 SCRN1Q12765 414 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 PLD1Q13393 1074 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 TXNDC11Q6PKC3 985 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 WASF1Q92558 559 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 ZC3H10Q96K80 434 aaKnown RBP15.23■□□□□ 0.03
SPCS3-204ENST00000513139 IFT74Q96LB3 600 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 LRRC3Q9BY71 257 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 OXCT2Q9BYC2 517 aaPredicted RBP15.23■□□□□ 0.03
SPCS3-204ENST00000513139 OBP2AQ9NY56 170 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 MYH11P35749 1972 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 AKAP13Q12802 2813 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 NBEAQ8NFP9 2946 aa15.23■□□□□ 0.03
SPCS3-204ENST00000513139 ARHGEF35A5YM69 484 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 K7ERI5 159 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 MED24O75448 989 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 CPB1P15086 417 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 PON2Q15165 354 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 RNF19BQ6ZMZ0 732 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 KBTBD6Q86V97 674 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 ARID3BQ8IVW6 561 aaPredicted RBP15.22■□□□□ 0.03
SPCS3-204ENST00000513139 KDF1Q8NAX2 398 aaPredicted RBP15.22■□□□□ 0.03
SPCS3-204ENST00000513139 KIFAP3Q92845 792 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms