RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 GARTP22102 1010 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 SP100P23497 879 aaPredicted RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 PTENP60484 403 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 ZXDAP98168 799 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 CAMK2GQ13555 558 aaPredicted RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 TFDP1Q14186 410 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 MRPL10Q7Z7H8 261 aaKnown RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 ZNF280BQ86YH2 543 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 ASAP3Q8TDY4 903 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 SPACA7Q96KW9 195 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 FAM193BQ96PV7 902 aaPredicted RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 MTMR9Q96QG7 549 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
TRIO-220ENST00000512979 ANKEF1Q9NU02 776 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 UBP1Q9NZI7 540 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 CDH22Q9UJ99 828 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 CNTNAP2Q9UHC6 1331 aa10.46□□□□□ -0.73
TRIO-220ENST00000512979 MUC6Q6W4X9 2439 aa10.46□□□□□ -0.74
TRIO-220ENST00000512979 TECTAO75443 2155 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 A0A087WWV3 80 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 A0A096LPE4 126 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 A0A1W2PPZ6 126 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 TMEM221A6NGB7 291 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 M0R296 226 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 ENC1O14682 589 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 GREM1O60565 184 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 TSPAN1O60635 241 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 DDHD2O94830 711 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 POMCP01189 267 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 ITGA4P13612 1032 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 NCLP19338 710 aaKnown RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 AXLP30530 894 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 MCM7P33993 719 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 SOX9P48436 509 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 RARRES1P49788 294 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 AFF1P51825 1210 aaKnown RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 GUCY1B3Q02153 619 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 GIT2Q14161 759 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 PCBP1Q15365 356 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIO-220ENST00000512979 SAFBQ15424 915 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIO-220ENST00000512979 SNAP47Q5SQN1 464 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 SDE2Q6IQ49 451 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 CES5AQ6NT32 575 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 NOTUMQ6P988 496 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 CCDC83Q8IWF9 413 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 TMEM102Q8N9M5 508 aaPredicted RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 SMG8Q8ND04 991 aaKnown RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 PIGOQ8TEQ8 1089 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 NXPE3Q969Y0 559 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 CCDC51Q96ER9 411 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 CPB2Q96IY4 423 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 VN1R3Q9BXE9 311 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 POLR3FQ9H1D9 316 aaPredicted RBP10.45□□□□□ -0.74
TRIO-220ENST00000512979 TMEM60Q9H2L4 133 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 ADAM7Q9H2U9 754 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 IPPQ9Y573 584 aa10.45□□□□□ -0.74
TRIO-220ENST00000512979 USO1O60763 962 aaKnown RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 ALDH2P05091 517 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 WEE2P0C1S8 567 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 EPCAMP16422 314 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 GLRA2P23416 452 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 ARL2P36404 184 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 ETFBP38117 255 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 NRLP54845 237 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 LMNB2Q03252 620 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 MBTD1Q05BQ5 628 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 ITIH3Q06033 890 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 POU5F1BQ06416 359 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 NCBP1Q09161 790 aaKnown RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 CAPSQ13938 189 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 PTPN14Q15678 1187 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 PKDCCQ504Y2 493 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 MAEAQ7L5Y9 396 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 C12orf76Q8N812 135 aaPredicted RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 C8orf76Q96K31 380 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 NECTIN4Q96NY8 510 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 GAD1Q99259 594 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 TMEM175Q9BSA9 504 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 APOL6Q9BWW8 343 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 TRIM6Q9C030 488 aaPredicted RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 CSRNP2Q9H175 543 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 POMKQ9H5K3 350 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 UBN1Q9NPG3 1134 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 STK39Q9UEW8 545 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 LIMCH1Q9UPQ0 1083 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 FAN1Q9Y2M0 1017 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 PRG3Q9Y2Y8 225 aaPredicted RBP10.44□□□□□ -0.74
TRIO-220ENST00000512979 NR2E1Q9Y466 385 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 HES2Q9Y543 173 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 IRAK3Q9Y616 596 aa10.44□□□□□ -0.74
TRIO-220ENST00000512979 C5orf42Q9H799 3197 aa10.43□□□□□ -0.74
TRIO-220ENST00000512979 J3QW42 95 aa10.43□□□□□ -0.74
TRIO-220ENST00000512979 NRP1O14786 923 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms