RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 SEMG2Q02383 582 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 STXBP5Q5T5C0 1151 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 ANKS3Q6ZW76 656 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 RLN3Q8WXF3 142 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
CLCN3-208ENST00000512813 P2RY13Q9BPV8 354 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 HPS4Q9NQG7 708 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 OTOL1A6NHN0 477 aaPredicted RBP10.42□□□□□ -0.74
CLCN3-208ENST00000512813 WDR64B1ANS9 1081 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 FAM86B1E9PN63 330 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 PRKCBP05771 671 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 FAM86B2P0C5J1 330 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 CR2P20023 1033 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 WEE1P30291 646 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 GALK1P51570 392 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 RUNX3Q13761 415 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 UBAP2LQ14157 1087 aaKnown RBP10.42□□□□□ -0.74
CLCN3-208ENST00000512813 UGCGQ16739 394 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 MAP7D1Q3KQU3 841 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 MTERF2Q49AM1 385 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 NOTUMQ6P988 496 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 SPACA3Q8IXA5 215 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 FRMD1Q8N878 549 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 EXOC4Q96A65 974 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 PGBD1Q96JS3 809 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 CDC6Q99741 560 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 FAM83CQ9BQN1 747 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 LRRC3Q9BY71 257 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 NIFKQ9BYG3 293 aaKnown RBP10.42□□□□□ -0.74
CLCN3-208ENST00000512813 ANO3Q9BYT9 981 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 CSRNP2Q9H175 543 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 THG1LQ9NWX6 298 aaKnown RBP10.42□□□□□ -0.74
CLCN3-208ENST00000512813 SAMM50Q9Y512 469 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 COL4A3BPQ9Y5P4 624 aa10.42□□□□□ -0.74
CLCN3-208ENST00000512813 NF1P21359 2839 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 A0A1W2PQD8 194 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 AP5Z1O43299 807 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 ERLIN2O94905 339 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 PRAMEF12O95522 483 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 AKAP5P24588 427 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 TKTP29401 623 aaKnown RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 AXLP30530 894 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 TWF1Q12792 350 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 PCBP1Q15365 356 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 NAIF1Q69YI7 327 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 TEX2Q8IWB9 1127 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 CMTR1Q8N1G2 835 aaKnown RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 CCDC26Q8TAB7 109 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 SETD7Q8WTS6 366 aaKnown RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 POLR3CQ9BUI4 534 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 HSPBP1Q9NZL4 362 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 TBX20Q9UMR3 447 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 HEMK1Q9Y5R4 338 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-208ENST00000512813 CEP192Q8TEP8 1941 aa10.41□□□□□ -0.74
CLCN3-208ENST00000512813 TMEM189-UBE2V1I3L0A0 370 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TSPAN1O60635 241 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 ALDH1A2O94788 518 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 FOSP01100 380 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 ZNF883P0CG24 379 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 UCNP55089 124 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 KCNH2Q12809 1159 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 BYSLQ13895 437 aaKnown RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 NAB2Q15742 525 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 CRY1Q16526 586 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TPGS2Q68CL5 300 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TMPRSS12Q86WS5 348 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TICAM2Q86XR7 235 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 USP33Q8TEY7 942 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 FGF11Q92914 225 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TBC1D32Q96NH3 1257 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 FAM117AQ9C073 453 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 SENP2Q9HC62 589 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 DISC1Q9NRI5 854 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 KLK14Q9P0G3 267 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-208ENST00000512813 MAFFQ9ULX9 164 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 MMP17Q9ULZ9 603 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
CLCN3-208ENST00000512813 TMEM150BA6NC51 233 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLCN3-208ENST00000512813 TMPRSS3P57727 454 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
CLCN3-208ENST00000512813 CCDC173Q0VFZ6 552 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 GRIK2Q13002 908 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 PSMD2Q13200 908 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 RTP5Q14D33 572 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms