RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SBNO2Q9Y2G9 1366 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 TRGV11A0A075B6L2 103 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 KLHL33A6NCF5 533 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 SLC43A1O75387 559 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 KATNA1O75449 491 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 RBMXL2O75526 392 aaKnown RBP3.11□□□□□ -1.91
PDGFC-208ENST00000512711 MYBL2P10244 700 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 CDC42EP1Q00587 391 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 DSC2Q02487 901 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 FPGSQ05932 587 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 MTMR1Q13613 665 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 DYRK1AQ13627 763 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 ABCB5Q2M3G0 1257 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 PABPC1LQ4VXU2 614 aaKnown RBP3.11□□□□□ -1.91
PDGFC-208ENST00000512711 KAZNQ674X7 775 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 RSPH3Q86UC2 560 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 COLGALT2Q8IYK4 626 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 CFAP52Q8N1V2 620 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.11□□□□□ -1.91
PDGFC-208ENST00000512711 NLGN4YQ8NFZ3 816 aaPredicted RBP3.11□□□□□ -1.91
PDGFC-208ENST00000512711 SLC9A6Q92581 669 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 TMEM125Q96AQ2 219 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 COA7Q96BR5 231 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 CLPTM1LQ96KA5 538 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 MED15Q96RN5 788 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 IMPG2Q9BZV3 1241 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 TRHDEQ9UKU6 1024 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 ST3GAL5Q9UNP4 418 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 FRMD4BQ9Y2L6 1034 aa3.11□□□□□ -1.91
PDGFC-208ENST00000512711 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.11□□□□□ -1.91
PDGFC-208ENST00000512711 PRAMEF33A0A0G2JMD5 474 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 A0A1W2PS29 197 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 LRRC14BA6NHZ5 514 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 ADM5C9JUS6 153 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 E9PLN8 166 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 GABRDO14764 452 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 XPOTO43592 962 aaKnown RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 PEX1O43933 1283 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 PRAMEF10O60809 474 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 HAUS5O94927 633 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 CLSTN1O94985 981 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 MTHFD1P11586 935 aaKnown RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 KCNA2P16389 499 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 LPOP22079 712 aaPredicted RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 CDKN1CP49918 316 aaPredicted RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 MAPK10P53779 464 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 KIF23Q02241 960 aaPredicted RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 SNAPC2Q13487 334 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 FAM50AQ14320 339 aaKnown RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 KHDC1Q4VXA5 237 aaKnown RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 SYDE2Q5VT97 1194 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 SLC30A10Q6XR72 485 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 TMPRSS9Q7Z410 1059 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 PEG10Q86TG7 708 aaKnown RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 SH2D3CQ8N5H7 860 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 PDPRQ8NCN5 879 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 HDAC10Q969S8 669 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 FBXL20Q96IG2 436 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 TEKT5Q96M29 485 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 VKORC1Q9BQB6 163 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 INTS13Q9NVM9 706 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 JKAMPQ9P055 326 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 ARPP21Q9UBL0 812 aaPredicted RBP3.1□□□□□ -1.91
PDGFC-208ENST00000512711 DMTF1Q9Y222 760 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 PRKAB1Q9Y478 270 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 TNKSO95271 1327 aa3.1□□□□□ -1.91
PDGFC-208ENST00000512711 CGB1A6NKQ9 187 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 F2RL2O00254 374 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 PROM1O43490 865 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 CD1AP06126 327 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 CHRM2P08172 466 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 SRGNP10124 158 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 CDK11BP21127 795 aaKnown RBP3.09□□□□□ -1.91
PDGFC-208ENST00000512711 PHKA1P46020 1223 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 GUCY2FP51841 1108 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 PROK1P58294 105 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 AMPD3Q01432 767 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 NHLH1Q02575 133 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 TLE1Q04724 770 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 ITKQ08881 620 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 FOXF2Q12947 444 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 GLCCI1Q86VQ1 547 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 ADGRG5Q8IZF4 528 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 TOR1AIP2Q8NFQ8 470 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 MYCBPAPQ8TBZ2 947 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 SMOC2Q9H3U7 446 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 SLC17A6Q9P2U8 582 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 ADAM21Q9UKJ8 722 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 AGAP1Q9UPQ3 857 aa3.09□□□□□ -1.91
PDGFC-208ENST00000512711 WDR27A2RRH5 827 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 WIPF3A6NGB9 483 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 NT5C1B-RDH14C9J2C7 533 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 MPPED1O15442 326 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 IGSF3O75054 1194 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 C1RP00736 705 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 PPP3CBP16298 524 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 MALP21145 153 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 ITPKBP27987 946 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 ABCG1P45844 678 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 KRTAP10-9P60411 292 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms