RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 PPP1R9BQ96SB3 815 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 PI4K2AQ9BTU6 479 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 STK33Q9BYT3 514 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 GANQ9H2C0 597 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 VRTNQ9H8Y1 702 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 NXF1Q9UBU9 619 aaKnown RBP11.65□□□□□ -0.54
PFDN1-204ENST00000512707 PLAGL2Q9UPG8 496 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 MICAL3Q7RTP6 2002 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 ANK1P16157 1881 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 KPNA7A9QM74 516 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 PIRO00625 290 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 TRAPPC3O43617 180 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 HUS1O60921 280 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 DGKIO75912 1065 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 BMP8BP34820 402 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 STAT1P42224 750 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 OR1G1P47890 313 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 DEFB103AP81534 67 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 SOX4Q06945 474 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 BTG3Q14201 252 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 ARHGAP44Q17R89 818 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 SFMBT2Q5VUG0 894 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 IQCEQ6IPM2 695 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 DCLRE1AQ6PJP8 1040 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 CMTR2Q8IYT2 770 aaKnown RBP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 VWCEQ96DN2 955 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 GDF15Q99988 308 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 TMEM175Q9BSA9 504 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 TTYH3Q9C0H2 523 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 XYLT2Q9H1B5 865 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 CXCL16Q9H2A7 254 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 CYP3A43Q9HB55 503 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 GOLGA2P5Q9HBQ8 144 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 SIX2Q9NPC8 291 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
PFDN1-204ENST00000512707 RNF19AQ9NV58 838 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 MIOSQ9NXC5 875 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 LTBP2Q14767 1821 aa11.64□□□□□ -0.55
PFDN1-204ENST00000512707 LRRC53A6NM62 1247 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 F8VZ95 297 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 B3GAT3O94766 335 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 NOL4O94818 638 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ALDH2P05091 517 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 KRT5P13647 590 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 FERP16591 822 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ATP2A2P16615 1042 aaKnown RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 USP8P40818 1118 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ALDH7A1P49419 539 aaKnown RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 CLCNKBP51801 687 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ADKP55263 362 aaKnown RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 BPIFB4P59827 614 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 DSC1Q08554 894 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 DRAP1Q14919 205 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 NAB2Q15742 525 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ASIC2Q16515 512 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 UPP1Q16831 310 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 PAN2Q504Q3 1202 aaKnown RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 SPOPLQ6IQ16 392 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 PDXDC1Q6P996 788 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 DSTYKQ6XUX3 929 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 SCARA5Q6ZMJ2 495 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 C16orf59Q7L2K0 433 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ARHGEF19Q8IW93 802 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 APPL2Q8NEU8 664 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-204ENST00000512707 DNAJC7Q99615 494 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 AAASQ9NRG9 546 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 ABHD10Q9NUJ1 306 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 GDAP2Q9NXN4 497 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 INSL6Q9Y581 213 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 SNX9Q9Y5X1 595 aa11.63□□□□□ -0.55
PFDN1-204ENST00000512707 PDCD11Q14690 1871 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 EPHB6O15197 1021 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TADA2AO75478 443 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 GJB5O95377 273 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 ODC1P11926 461 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 LAG3P18627 525 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 SOX5P35711 763 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 MAGEA10P43363 369 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 GATMP50440 423 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms