RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SCP2P22307 547 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 SERPINB3P29508 390 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 FEN1P39748 380 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 SMAD1Q15797 465 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 ARMC4Q5T2S8 1044 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SRBD1Q8N5C6 995 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 WDR60Q8WVS4 1066 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TSPAN17Q96FV3 270 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PPP1R16AQ96I34 528 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 MED15Q96RN5 788 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CDH7Q9ULB5 785 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PADI4Q9UM07 663 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ANO9A1A5B4 782 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 AP3B1O00203 1094 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ADCY6O43306 1168 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 HIST1H2ABP04908 130 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 NLRP12P59046 1061 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 FANCCQ00597 558 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 RBBP4Q09028 425 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 C6orf10Q5SRN2 563 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 FAM102AQ5T9C2 384 aaPredicted RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 ALS2CLQ60I27 953 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 HIST3H2AQ7L7L0 130 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 HIST1H2ACQ93077 130 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 CCDC134Q9H6E4 229 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 MED4Q9NPJ6 270 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ADGRA2Q96PE1 1338 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SARSP49591 514 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 LRRC69Q6ZNQ3 347 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 FAM162AQ96A26 154 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SAAL1Q96ER3 474 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SUCLG2Q96I99 432 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ARHGEF38Q9NXL2 777 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SPG21Q9NZD8 308 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 IL1RAPL1Q9NZN1 696 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 PCSK1NQ9UHG2 260 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 NOX1Q9Y5S8 564 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 COPEO14579 308 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ZMYND11Q15326 602 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 TCEA2Q15560 299 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 RASIP1Q5U651 963 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 C8orf58Q8NAV2 365 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 TESCQ96BS2 214 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 CEP95Q96GE4 821 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 WDR35Q9P2L0 1181 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 VPS28Q9UK41 221 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 RNF103-CHMP3A0A140T963 221 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 CARNS1A5YM72 827 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 BTBD18B2RXH4 712 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ENDOD1O94919 500 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SLC8A1P32418 973 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 HNMTP50135 292 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ST13P50502 369 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 NEK2P51955 445 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 DDX39BQ13838 428 aaKnown RBP9.34□□□□□ -0.91
VCAN-208ENST00000512590 METTL21CQ5VZV1 264 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 CYFIP1Q7L576 1253 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 ZBTB1Q9Y2K1 713 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 SNX9Q9Y5X1 595 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
VCAN-208ENST00000512590 EXOC1LA0A1B0GW35 172 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 GMPSP49915 693 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 EFNA5P52803 228 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 VSNL1P62760 191 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 LRRC41Q15345 812 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CXorf40BQ96DE9 158 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ELL3Q9HB65 397 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 INTS7Q9NVH2 962 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 ADA2Q9NZK5 511 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 UVRAGQ9P2Y5 699 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 PCDHA6Q9UN73 950 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 AGAP1Q9UPQ3 857 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 PCDHA8Q9Y5H6 950 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 EFCAB5A4FU69 1503 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 HMGXB3Q12766 1538 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 SLC16A4O15374 487 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 STX7O15400 261 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 PDGFRBP09619 1106 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CCT5P48643 541 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 RBP5P82980 135 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms