RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336	PKN3	Q6P5Z2	889 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	RALGPS2	Q86X27	583 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	TCEAL3	Q969E4	200 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	LRRC3B	Q96PB8	259 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	LARP6	Q9BRS8	491 aa	Known RBP	13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	GPR88	Q9GZN0	384 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	GTSE1	Q9NYZ3	720 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	AFF4	Q9UHB7	1163 aa	Known RBP	13.4	□□□□□ -0.26
DDR1-267	ENST00000512336	PCDHGA5	Q9Y5G8	931 aa		13.4	□□□□□ -0.26
DDR1-267	ENST00000512336		A0A1W2PRU2	124 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	CDC45	O75419	566 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	ZNF252P-AS1	Q0IIN9	211 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	STK3	Q13188	491 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	STXBP5	Q5T5C0	1151 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	NT5DC1	Q5TFE4	455 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	SYNPO	Q8N3V7	929 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	CEP120	Q8N960	986 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	DEPTOR	Q8TB45	409 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	EDEM2	Q9BV94	578 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	KIFC3	Q9BVG8	833 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	TTC12	Q9H892	705 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	VPS45	Q9NRW7	570 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	WASF3	Q9UPY6	502 aa		13.39	□□□□□ -0.27
DDR1-267	ENST00000512336	DTNB	O60941	627 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	TOP3B	O95985	862 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	XRCC6	P12956	609 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	PSMA5	P28066	241 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	TXK	P42681	527 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	CALCRL	Q16602	461 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	ATF7IP2	Q5U623	682 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	ZNF280D	Q6N043	979 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	CPLX2	Q6PUV4	134 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	RNF19B	Q6ZMZ0	732 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	TMC8	Q8IU68	726 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	ZMAT2	Q96NC0	199 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	LRRC3	Q9BY71	257 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	ADAM33	Q9BZ11	813 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	YIPF1	Q9Y548	306 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	NUB1	Q9Y5A7	615 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	LAMA5	O15230	3695 aa		13.38	□□□□□ -0.27
DDR1-267	ENST00000512336	SETX	Q7Z333	2677 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	CCDC163	A0A0D9SF12	145 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	SRRM3	A6NNA2	597 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	C4orf47	A7E2U8	309 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	AKAP3	O75969	853 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	SPATA31C1	P0DKV0	1188 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	CPB1	P15086	417 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	NAMPT	P43490	491 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	YARS	P54577	528 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	OSTN	P61366	133 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	TNK2	Q07912	1038 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	NR5A1	Q13285	461 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	PLK5	Q496M5	336 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	ARHGAP29	Q52LW3	1261 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	XKR4	Q5GH76	650 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	ZNF274	Q96GC6	653 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	ZC3H10	Q96K80	434 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	MKNK1	Q9BUB5	465 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	MAFF	Q9ULX9	164 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	GCN1	Q92616	2671 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	FREM2	Q5SZK8	3169 aa		13.37	□□□□□ -0.27
DDR1-267	ENST00000512336	SPAG17	Q6Q759	2223 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	TMEM8B	A6NDV4	472 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	DPYSL4	O14531	572 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	VNN2	O95498	520 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	XBP1	P17861	261 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	GRM5	P41594	1212 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	SH3PXD2A	Q5TCZ1	1133 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	ALKAL1	Q6UXT8	129 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	RUFY3	Q7L099	469 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	HAUS6	Q7Z4H7	955 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	DDX12P	Q92771	950 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	GATA6	Q92908	595 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	C18orf25	Q96B23	403 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	SUSD3	Q96L08	255 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	TBC1D32	Q96NH3	1257 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	PGLYRP2	Q96PD5	576 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	CCDC94	Q9BW85	323 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	DNAJC25	Q9H1X3	360 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	CDT1	Q9H211	546 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	CRISPLD1	Q9H336	500 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	POLD4	Q9HCU8	107 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	SLC38A7	Q9NVC3	462 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	SLC8A2	Q9UPR5	921 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	TRIP11	Q15643	1979 aa		13.36	□□□□□ -0.27
DDR1-267	ENST00000512336	WNT7A	O00755	349 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	NEMF	O60524	1076 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	MED24	O75448	989 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	PRAMEF12	O95522	483 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	OR4Q2	P0C623	313 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	CYP11B2	P19099	503 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	RPL9	P32969	192 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	MCM4	P33991	863 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	EFNA5	P52803	228 aa		13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	CACNB1	Q02641	598 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-267	ENST00000512336	RING1	Q06587	406 aa		13.35	□□□□□ -0.27

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