RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 ATP6V1G3Q96LB4 118 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 A0A0A6YYK5 440 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 H3BRJ5 948 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ACKR2O00590 384 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ITIH2P19823 946 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 PNPLA4P41247 253 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 SLC13A5Q86YT5 568 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ZBED8Q8IZ13 594 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ZBTB45Q96K62 511 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 PORCNQ9H237 461 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 SETD4Q9NVD3 440 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 KLK14Q9P0G3 267 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 BAIAP2L1Q9UHR4 511 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF286BP0CG31 522 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 PCSK1P29120 753 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 TAF6P49848 677 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 FOXR2Q6PJQ5 311 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 GLB1LQ6UWU2 654 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 GDAP1Q8TB36 358 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 INPP4AQ96PE3 977 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 GCNT1Q02742 428 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 NR1H3Q13133 447 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 BTBD8Q5XKL5 378 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
PCDHA4-202ENST00000512229 A0A087WUV0 522 aaPredicted RBP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CXCL8P10145 99 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 COG7P83436 770 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 THOC5Q13769 683 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 BYSLQ13895 437 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CYP4A22Q5TCH4 519 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 SMYD2Q9NRG4 433 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 WDR91A4D1P6 747 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 APOL1O14791 398 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CST8O60676 142 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 KRT38O76015 456 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CLK2P49760 499 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 SLC9A9Q8IVB4 645 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 ATP11CQ8NB49 1132 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 TMEM161BQ8NDZ6 487 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 OSMRQ99650 979 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 ASTN1O14525 1302 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 SPATA31C2B4DYI2 1134 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CSPG5O95196 566 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 BRAFP15056 766 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CPB1P15086 417 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 DMTNQ08495 405 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 EFCAB13Q8IY85 973 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 PNKPQ96T60 521 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 ISCUQ9H1K1 167 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 ALS2Q96Q42 1657 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 NFASCO94856 1347 aa13.81□□□□□ -0.2
PCDHA4-202ENST00000512229 EPHB6O15197 1021 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 RALAP11233 206 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ACADSBP45954 432 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 SEPT6Q14141 434 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 PSMD6Q15008 389 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 KLHL38Q2WGJ6 581 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 WDR93Q6P2C0 686 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 DEPDC1BQ8WUY9 529 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 VIRMAQ69YN4 1812 aaKnown RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 MANSC4A6NHS7 340 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 RBP3P10745 1247 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 FGFR4P22455 802 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 AP1B1Q10567 949 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 SPARCL1Q14515 664 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 GRIK4Q16099 956 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 HIF1AQ16665 826 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 SMTNL2Q2TAL5 461 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 PID1Q7Z2X4 250 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 RNF180Q86T96 592 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ARHGEF19Q8IW93 802 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms