RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 IL31RAQ8NI17 732 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 TBC1D15Q8TC07 691 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 Q8TCH9 128 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 ANKS1AQ92625 1134 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 EDAQ92838 391 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 SCAMP4Q969E2 229 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 PHACTR3Q96KR7 559 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 MOGAT1Q96PD6 335 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 MNTQ99583 582 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 MYD88Q99836 296 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 C1orf43Q9BWL3 253 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 C22orf23Q9BZE7 217 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 BHMT2Q9H2M3 363 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 PNPLA8Q9NP80 782 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 SLC52A1Q9NWF4 448 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 EIF2B4Q9UI10 523 aaKnown RBP4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
CALCOCO2-220ENST00000511816 PNPLA7Q6ZV29 1317 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 CDHR4A6H8M9 788 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 APAF1O14727 1248 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 MUSKO15146 869 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 AGFG2O95081 481 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 ITGB1P05556 798 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 KITP10721 976 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 ADAM17P78536 824 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 BTKQ06187 659 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 RAB32Q13637 225 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 PRKD1Q15139 912 aaPredicted RBP4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 CNGA2Q16280 664 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 GORABQ5T7V8 394 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 LMBRD2Q68DH5 695 aaPredicted RBP4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 IL31Q6EBC2 164 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 MAMDC4Q6UXC1 1216 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 PPP1R3BQ86XI6 285 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 EXOC8Q8IYI6 725 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 IPCEF1Q8WWN9 437 aaPredicted RBP4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 PHKBQ93100 1093 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 ADOQ96SZ5 270 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 PNKPQ96T60 521 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 MPHOSPH6Q99547 160 aaKnown RBP4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 ELAC2Q9BQ52 826 aaKnown RBP4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 CNPPD1Q9BV87 410 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 GPR35Q9HC97 309 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 NLRC4Q9NPP4 1024 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 MED16Q9Y2X0 877 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 NEU2Q9Y3R4 380 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 PLEKHM1Q9Y4G2 1056 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 COMMD10Q9Y6G5 202 aa4.84□□□□□ -1.63
CALCOCO2-220ENST00000511816 ZNF785A8K8V0 405 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 TPD52L2O43399 206 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 PPFIA4O75335 1185 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 PEX14O75381 377 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 MATN4O95460 622 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 AHSGP02765 367 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 HLA-DOAP06340 250 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SBK3P0C264 359 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 XRCC6P12956 609 aaKnown RBP eCLIP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZKSCAN1P17029 563 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 EN2P19622 333 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 NEK3P51956 506 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 RHBDL3P58872 404 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 PSMC1P62191 440 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 EXOSC9Q06265 439 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZNF844Q08AG5 666 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 GALEQ14376 348 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 ICAM4Q14773 271 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 LONRF3Q496Y0 759 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 DPP9Q86TI2 863 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 FAM186BQ8IYM0 893 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZNF808Q8N4W9 903 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SLC17A8Q8NDX2 589 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 DNERQ8NFT8 737 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 MED15Q96RN5 788 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 RPS6KC1Q96S38 1066 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 STRBPQ96SI9 672 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SMOQ99835 787 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SSBP3Q9BWW4 388 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 UNKQ9C0B0 810 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 KLC2Q9H0B6 622 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 RNPEPQ9H4A4 650 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SERHLQ9NQF3 203 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 KLHL11Q9NVR0 708 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZSCAN32Q9NX65 697 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 RNF181Q9P0P0 153 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 SRRDQ9UH36 339 aa4.83□□□□□ -1.64
CALCOCO2-220ENST00000511816 MYO1FO00160 1098 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 TRIM24O15164 1050 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZNF20P17024 532 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 GCSHP23434 173 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 PHKA1P46020 1223 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZNF135P52742 658 aaPredicted RBP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 CHN2P52757 468 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 SUMO3P55854 103 aaPredicted RBP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 NHLH2Q02577 135 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms