RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 HOXD12P35452 270 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 DPP6P42658 865 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 PTGER3P43115 390 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 MCM2P49736 904 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 NPEPPSP55786 919 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 ARPP19P56211 112 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNF8-207ENST00000509995 MBTD1Q05BQ5 628 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 TPGS2Q68CL5 300 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 ANO7Q6IWH7 933 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 LPCAT2Q7L5N7 544 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 TMC8Q8IU68 726 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 BPIFB1Q8TDL5 484 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 GJA10Q969M2 543 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 CNOT6LQ96LI5 555 aaKnown RBP11.94□□□□□ -0.5
SNF8-207ENST00000509995 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
SNF8-207ENST00000509995 MTA3Q9BTC8 594 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 FBRSL1Q9HCM7 1045 aaKnown RBP11.94□□□□□ -0.5
SNF8-207ENST00000509995 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
SNF8-207ENST00000509995 TPCN1Q9ULQ1 816 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 DOPEY2Q9Y3R5 2298 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 SPTAN1Q13813 2472 aaKnown RBP11.94□□□□□ -0.5
SNF8-207ENST00000509995 OTOL1A6NHN0 477 aaPredicted RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 PYCARD-AS1I3L0S3 204 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 B4GALT5O43286 388 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 PSMD10O75832 226 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 NTRK1P04629 796 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 ITPKBP27987 946 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 RFC5P40937 340 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 GFPT1Q06210 699 aaPredicted RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 B3GNT9Q6UX72 402 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 MICU3Q86XE3 530 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 TMTC2Q8N394 836 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 OR2I1PQ8NGU4 316 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 TCP11Q8WWU5 503 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 CAPN10Q9HC96 672 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 HPS4Q9NQG7 708 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 PILRBQ9UKJ0 227 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 SLC6A14Q9UN76 642 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
SNF8-207ENST00000509995 HELZP42694 1942 aaKnown RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
SNF8-207ENST00000509995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 A0A1B0GUA9 196 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 TRABD2BA6NFA1 517 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 ADAMTS3O15072 1205 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 RECQL4O94761 1208 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 BRCC3P46736 316 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 PSMC5P62195 406 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 SLC14A1Q13336 389 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 RUNX3Q13761 415 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 EMC2Q15006 297 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 LYSMD4Q5XG99 296 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 CD300LGQ6UXG3 332 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 SLCO6A1Q86UG4 719 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 TMEFF1Q8IYR6 380 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 REXO1Q8N1G1 1221 aaKnown RBP11.92□□□□□ -0.5
SNF8-207ENST00000509995 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 MDGA1Q8NFP4 955 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 EZH1Q92800 747 aaPredicted RBP11.92□□□□□ -0.5
SNF8-207ENST00000509995 FNBP1Q96RU3 617 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 THG1LQ9NWX6 298 aaKnown RBP11.92□□□□□ -0.5
SNF8-207ENST00000509995 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
SNF8-207ENST00000509995 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
SNF8-207ENST00000509995 TEX51A0A1B0GUA7 166 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 PRC1O43663 620 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 SERPINF2P08697 491 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 ITPKAP23677 461 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 CLCNKBP51801 687 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 AMPD2Q01433 879 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 FUT2Q10981 343 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 MXD4Q14582 209 aaPredicted RBP11.91□□□□□ -0.5
SNF8-207ENST00000509995 DUOXA1Q1HG43 343 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 SPDYCQ5MJ68 293 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 NAIF1Q69YI7 327 aaPredicted RBP11.91□□□□□ -0.5
SNF8-207ENST00000509995 KRT25Q7Z3Z0 450 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 GLRX5Q86SX6 157 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 CEP76Q8TAP6 659 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 SPACA7Q96KW9 195 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 P2RY13Q9BPV8 354 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 FAM83CQ9BQN1 747 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 POLR3CQ9BUI4 534 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms