RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FBXW11Q9UKB1 542 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 SSX2IPQ9Y2D8 614 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 DERAQ9Y315 318 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 UBE4BO95155 1302 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 LOC730098B7Z3J9 87 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 N4BP1O75113 896 aaKnown RBP14.67□□□□□ -0.06
SNF8-206ENST00000509989 IL18RAPO95256 599 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 LDHAP00338 332 aaKnown RBP14.67□□□□□ -0.06
SNF8-206ENST00000509989 DLG4P78352 724 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 CYP24A1Q07973 514 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 SNRNP35Q16560 246 aaKnown RBP14.67□□□□□ -0.06
SNF8-206ENST00000509989 CCDC142Q17RM4 750 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 CTXN3Q4LDR2 81 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 DSTYKQ6XUX3 929 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 STXBP4Q6ZWJ1 553 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 CCDC127Q96BQ5 260 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 DZANK1Q9NVP4 752 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 DMAC2Q9NW81 257 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 AGAP1Q9UPQ3 857 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 PCDHA5Q9Y5H7 936 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 BACE2Q9Y5Z0 518 aa14.67□□□□□ -0.06
SNF8-206ENST00000509989 GOLGA6L4A6NEF3 574 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 ZNF233A6NK53 670 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 C2CD4DB7Z1M9 353 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 SYN3O14994 580 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 CCL16O15467 120 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 TRAPPC3O43617 180 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 ZMYND10O75800 440 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 SRGAP2BP0DMP2 458 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 PSMD2Q13200 908 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 SLC8B1Q6J4K2 584 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 POTEHQ6S545 545 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 RNF19BQ6ZMZ0 732 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 ANKS3Q6ZW76 656 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 OSTM1Q86WC4 334 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 C12orf56Q8IXR9 622 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 TTC9BQ8N6N2 239 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 XXYLT1Q8NBI6 393 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 OR10T2Q8NGX3 314 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 EEF2KMTQ96G04 330 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
SNF8-206ENST00000509989 SMOC2Q9H3U7 446 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 INTS13Q9NVM9 706 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 HCFC1R1Q9NWW0 138 aa14.66□□□□□ -0.06
SNF8-206ENST00000509989 FSD2A1L4K1 749 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 XPOTO43592 962 aaKnown RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 ABLIM3O94929 683 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 CST3P01034 146 aaPredicted RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 MYL1P05976 194 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 C8AP07357 584 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 DLATP10515 647 aaKnown RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 POU5F1Q01860 360 aaKnown RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 ITIH3Q06033 890 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 KCNB1Q14721 858 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 C1orf220Q5T0J3 134 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 WSCD1Q658N2 575 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 CSGALNACT2Q8N6G5 542 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 SLC7A14Q8TBB6 771 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 SMG7Q92540 1137 aaKnown RBP14.65□□□□□ -0.06
SNF8-206ENST00000509989 MFSD14AQ96MC6 490 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 PGLYRP2Q96PD5 576 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 PRKAG3Q9UGI9 489 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 MUTYHQ9UIF7 546 aa14.65□□□□□ -0.06
SNF8-206ENST00000509989 CYB561D2O14569 222 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 EXOC3O60645 756 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
SNF8-206ENST00000509989 OAZ2O95190 189 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 NR3C1P04150 777 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 KRT19P08727 400 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 CD44P16070 742 aaKnown RBP14.64□□□□□ -0.07
SNF8-206ENST00000509989 BMP6P22004 513 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 PRCPP42785 496 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 TAF6P49848 677 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 BFSP1Q12934 665 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 PSMD6Q15008 389 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 ZCWPW2Q504Y3 356 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 CES5AQ6NT32 575 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 HS2ST1Q7LGA3 356 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 SPATA20Q8TB22 786 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 TSPAN18Q96SJ8 248 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 PRKD2Q9BZL6 878 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 C11orf16Q9NQ32 467 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 NME7Q9Y5B8 376 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 PTPRDP23468 1912 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 TECTAO75443 2155 aa14.64□□□□□ -0.07
SNF8-206ENST00000509989 TRIM49BA6NDI0 452 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 LRRIQ3A6PVS8 624 aaPredicted RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 KPNA7A9QM74 516 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 PDXKO00764 312 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 KIAA0391O15091 583 aaKnown RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 LRRN2O75325 713 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 SOAT2O75908 522 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 PAPLNO95428 1278 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms