RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ATP9AO75110 1047 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 RTN3O95197 1032 aaPredicted RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 LYPLA2O95372 231 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 KRT7P08729 469 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 ZFXP17010 805 aaPredicted RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 RPL9P32969 192 aaKnown RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 MDM2Q00987 491 aaPredicted RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 PPP6R3Q5H9R7 873 aaPredicted RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 MAP4K3Q8IVH8 894 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 KLHL7Q8IXQ5 586 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 IFT43Q96FT9 208 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 OXCT2Q9BYC2 517 aaPredicted RBP5.44□□□□□ -1.54
PHF3-210ENST00000509876 SPG21Q9NZD8 308 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 PGAP2Q9UHJ9 254 aa5.44□□□□□ -1.54
PHF3-210ENST00000509876 UQCRHLA0A096LP55 91 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 UQCRHP07919 91 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 HMBSP08397 361 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 VDRP11473 427 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SCNN1GP51170 649 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TLE2Q04725 743 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 FAM43BQ6ZT52 329 aaPredicted RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ETNPPLQ8TBG4 499 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 KBTBD4Q9NVX7 518 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 DDX43Q9NXZ2 648 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 ANAPC7Q9UJX3 599 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ATF2P15336 505 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SERPINB6P35237 376 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SLC12A3P55017 1021 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 DYNLT1P63172 113 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 AMHR2Q16671 573 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 HSDL1Q3SXM5 330 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 JADE1Q6IE81 842 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TLR8Q9NR97 1041 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 KRT82Q9NSB4 513 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PPP2R2CQ9Y2T4 447 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 LACTBL1A8MY62 500 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 RECQL4O94761 1208 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TJP3O95049 919 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 WEE2P0C1S8 567 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TCP1P17987 556 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 BCAR1P56945 870 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PTENP60484 403 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 MDH1BQ5I0G3 518 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 DCLRE1AQ6PJP8 1040 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PALM2Q8IXS6 379 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 MORC4Q8TE76 937 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 RPGRIP1Q96KN7 1286 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 GAD1Q99259 594 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SYT15Q9BQS2 421 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 NUP85Q9BW27 656 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 NIFKQ9BYG3 293 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 FBXO44Q9H4M3 255 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 LIMA1Q9UHB6 759 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.43□□□□□ -1.543e-7■■□□□ 11.9
PHF3-210ENST00000509876 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 NID2Q14112 1375 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 GIPC1O14908 333 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TREHO43280 583 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 CKMP06732 381 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 DARSP14868 501 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 RGS7P49802 495 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 IRF5Q13568 498 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 LEKR1Q6ZMV7 388 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 CBWD2Q8IUF1 395 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 NPAS4Q8IUM7 802 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TTC13Q8NBP0 860 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PNMA5Q96PV4 448 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 MUC3BQ9H195 1237 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TRMT13Q9NUP7 481 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 TMEM51Q9NW97 253 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SAR1BQ9Y6B6 198 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TMEM150BA6NC51 233 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 MFAP3LO75121 409 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 RTN2O75298 545 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ZBED1O96006 694 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 S100BP04271 92 aaPredicted RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 RWDD2BP57060 319 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TPI1P60174 286 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 RABGAP1LQ5R372 815 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 LLGL2Q6P1M3 1020 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 USP49Q70CQ1 688 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 BRSK2Q8IWQ3 736 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PDCL2Q8N4E4 241 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 GDAP1Q8TB36 358 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 PPP1R13LQ8WUF5 828 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ACSF2Q96CM8 615 aaPredicted RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 KRT12Q99456 494 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SPON2Q9BUD6 331 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 TMEM117Q9H0C3 514 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 SIK2Q9H0K1 926 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.43□□□□□ -1.54
PHF3-210ENST00000509876 OLA1Q9NTK5 396 aaKnown RBP5.43□□□□□ -1.54
PHF3-210ENST00000509876 GTF2IRD1Q9UHL9 959 aa5.43□□□□□ -1.54
PHF3-210ENST00000509876 ABHD14A-ACY1A0A1B0GW23 586 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms