RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
PRDM16-205ENST00000509860 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
PRDM16-205ENST00000509860 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
PRDM16-205ENST00000509860 OSMRQ99650 979 aa13.34□□□□□ -0.27
PRDM16-205ENST00000509860 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
PRDM16-205ENST00000509860 FAM49AQ9H0Q0 323 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-205ENST00000509860 SMIM35A0A1B0GVV1 85 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 KCNK3O14649 394 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PEX5P50542 639 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 RNASE9P60153 205 aaKnown RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 CKAP4Q07065 602 aaKnown RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 WDR44Q5JSH3 913 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PASD1Q8IV76 773 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 MCOLN2Q8IZK6 566 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF513Q8N8E2 541 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 GDAP1L1Q96MZ0 367 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 Q9Y3F1 56 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ZSCAN5CA6NGD5 496 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ALKAL1Q6UXT8 129 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 DNAJB3Q8WWF6 145 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 UBXN6Q9BZV1 441 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 CYTH4Q9UIA0 394 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PCDHB4Q9Y5E5 795 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PPEF2O14830 753 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ITGA4P13612 1032 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 AP3M2P53677 418 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 TRADDQ15628 312 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 UBXN11Q5T124 520 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PHLDB2Q86SQ0 1253 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ACTRT1Q8TDG2 376 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 HNRNPLLQ8WVV9 542 aaKnown RBP13.33□□□□□ -0.28
PRDM16-205ENST00000509860 NUP85Q9BW27 656 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 NIF3L1Q9GZT8 377 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 SMYD3Q9H7B4 428 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 HES2Q9Y543 173 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
PRDM16-205ENST00000509860 ZEB2O60315 1214 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 PRKCZQ05513 592 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 RPS6KA1Q15418 735 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 SCARA5Q6ZMJ2 495 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 HHIPL1Q96JK4 782 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 SUFUQ9UMX1 484 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 TARSL2A2RTX5 802 aaKnown RBP13.32□□□□□ -0.28
PRDM16-205ENST00000509860 CCDC151A5D8V7 595 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 PHACTR2O75167 634 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 GJB6O95452 261 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 DARSP14868 501 aaKnown RBP13.32□□□□□ -0.28
PRDM16-205ENST00000509860 RRM1P23921 792 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 GNA15P30679 374 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 CDH8P55286 799 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
PRDM16-205ENST00000509860 NAA35Q5VZE5 725 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 RPGRIP1Q96KN7 1286 aa13.32□□□□□ -0.28
PRDM16-205ENST00000509860 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
PRDM16-205ENST00000509860 RRN3P2A6NIE6 340 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 O00370 1275 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 IL18RAPO95256 599 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ITGB3P05106 788 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 MYL3P08590 195 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 CD58P19256 250 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 TMOD1P28289 359 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ORC1Q13415 861 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF677Q86XU0 584 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 UPF3AQ9H1J1 476 aaKnown RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 MAP2K7O14733 419 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 COMTP21964 271 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 NKX3-2P78367 333 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ZBTB6Q15916 424 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 RHOT2Q8IXI1 618 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 RABEP2Q9H5N1 569 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 NPTXRO95502 500 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 GLI1P08151 1106 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 CYP2C9P11712 490 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 GRM5P41594 1212 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 PSMC4P43686 418 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 CPT1AP50416 773 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 POU5F1Q01860 360 aaKnown RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms