RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 KINO60870 393 aaKnown RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 LRG1P02750 347 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 ADRB2P07550 413 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 NFICP08651 508 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 CLTAP09496 248 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 DDIT3P35638 169 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 LIG4P49917 911 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 CASP5P51878 434 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 GTF2BQ00403 316 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 UBXN2BQ14CS0 331 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 SLC44A4Q53GD3 710 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 SLC8B1Q6J4K2 584 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 MAP4K3Q8IVH8 894 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 KIAA2013Q8IYS2 634 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 ING5Q8WYH8 240 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 DDX12PQ92771 950 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 BORCS6Q96GS4 357 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 SUSD3Q96L08 255 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 STRA6Q9BX79 667 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 PANK2Q9BZ23 570 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 CPSF3Q9UKF6 684 aaKnown RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 MRPS23Q9Y3D9 190 aaKnown RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
RNF4-212ENST00000509258 F5P12259 2224 aa11.87□□□□□ -0.51
RNF4-212ENST00000509258 FAM170BA6NMN3 283 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 SYN3O14994 580 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 SPTLC1O15269 473 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 OGTO15294 1046 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 STX6O43752 255 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 LRRN2O75325 713 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 ECI2O75521 394 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 ABLIM3O94929 683 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 RHOP08100 348 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 OR4Q2P0C623 313 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 PDCP20941 246 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 ADSSP30520 456 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 LRPAP1P30533 357 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 MCM4P33991 863 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
RNF4-212ENST00000509258 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
RNF4-212ENST00000509258 ACOT2P49753 483 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 CDR1P51861 262 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 ARPP19P56211 112 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 SLC39A14Q15043 492 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 JADE1Q6IE81 842 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 CRELD2Q6UXH1 353 aaPredicted RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 TPRG1Q6ZUI0 275 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 MAML2Q8IZL2 1156 aaPredicted RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 RASSF8Q8NHQ8 419 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 RMDN1Q96DB5 314 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 MSTO1Q9BUK6 570 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 CRISPLD1Q9H336 500 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 LTB4R2Q9NPC1 389 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 TFIP11Q9UBB9 837 aaKnown RBP11.86□□□□□ -0.51
RNF4-212ENST00000509258 PCDHGA2Q9Y5H1 932 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 FRYLO94915 3013 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 NCOR2Q9Y618 2525 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
RNF4-212ENST00000509258 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
RNF4-212ENST00000509258 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 H0YCG3 227 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 PRRG1O14668 218 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 NCAM2O15394 837 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 CCR2P41597 374 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 NASPP49321 788 aaPredicted RBP11.85□□□□□ -0.51
RNF4-212ENST00000509258 PKP1Q13835 747 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 ZNF852Q6ZMS4 543 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 ZNF720Q7Z2F6 126 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 ELMOD1Q8N336 334 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 HPS3Q969F9 1004 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 TCEAL4Q96EI5 215 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 TMEM209Q96SK2 561 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 NELL2Q99435 816 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 MRPS17Q9Y2R5 130 aaKnown RBP11.85□□□□□ -0.51
RNF4-212ENST00000509258 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 PTPRDP23468 1912 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 ANAPC1Q9H1A4 1944 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 NCANO14594 1321 aa11.85□□□□□ -0.51
RNF4-212ENST00000509258 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
RNF4-212ENST00000509258 M0QZQ0 153 aa11.84□□□□□ -0.51
RNF4-212ENST00000509258 ZNF197O14709 1029 aa11.84□□□□□ -0.51
RNF4-212ENST00000509258 XPOTO43592 962 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms