RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 MYO1EQ12965 1108 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 BTG3Q14201 252 aaPredicted RBP9.3□□□□□ -0.92
USP46-207ENST00000508499 EXOC3L4Q17RC7 722 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 LRIT3Q3SXY7 679 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 SV2CQ496J9 727 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 HSP90AA4PQ58FG1 418 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 GLRA4Q5JXX5 417 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 ZNF280BQ86YH2 543 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 RNF169Q8NCN4 708 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 EHBP1Q8NDI1 1231 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 C18orf25Q96B23 403 aaPredicted RBP9.3□□□□□ -0.92
USP46-207ENST00000508499 NAP1L5Q96NT1 182 aaPredicted RBP9.3□□□□□ -0.92
USP46-207ENST00000508499 YME1L1Q96TA2 773 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 VPS16Q9H269 839 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 GRPEL1Q9HAV7 217 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 AAASQ9NRG9 546 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 TAB2Q9NYJ8 693 aa9.3□□□□□ -0.92
USP46-207ENST00000508499 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 TLL1O43897 1013 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 B4GALT3O60512 393 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 UPP2O95045 317 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 HLA-DRAP01903 254 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 CYP11A1P05108 521 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 RB1P06400 928 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 CDC25BP30305 580 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 ALDH7A1P49419 539 aaKnown RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 TAF6P49848 677 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 CLCNKBP51801 687 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 PLCB3Q01970 1234 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 UBXN1Q04323 297 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 RNASELQ05823 741 aaKnown RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 ELAVL2Q12926 359 aaKnown RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 TRPC3Q13507 836 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 CD300LGQ6UXG3 332 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 FIBCD1Q8N539 461 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 CCDC150Q8NCX0 1101 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 NUP58Q9BVL2 599 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 COLEC11Q9BWP8 271 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 BCO2Q9BYV7 579 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 XPO4Q9C0E2 1151 aaKnown RBP9.29□□□□□ -0.92
USP46-207ENST00000508499 TTYH3Q9C0H2 523 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 GCNT4Q9P109 453 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 APEX2Q9UBZ4 518 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 ADAM28Q9UKQ2 775 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 MYO6Q9UM54 1294 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 CNTN6Q9UQ52 1028 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 LZTS1Q9Y250 596 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 INPP5FQ9Y2H2 1132 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 ATG2AQ2TAZ0 1938 aa9.29□□□□□ -0.92
USP46-207ENST00000508499 PTPRDP23468 1912 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 LAMA2P24043 3122 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 TMEM265A0A087WTH1 108 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 A0A1W2PQJ5 194 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 KPNA7A9QM74 516 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 PODXLO00592 558 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 NRP1O14786 923 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 SYN3O14994 580 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 AP5Z1O43299 807 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 PHACTR2O75167 634 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 TACC1O75410 805 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 P4HA1P13674 534 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 POLR2BP30876 1174 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 PIK3CAP42336 1068 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 GATMP50440 423 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 BCAR1P56945 870 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 NOP14P78316 857 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 UBE3AQ05086 875 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 INCA1Q0VD86 236 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 BIRC3Q13489 604 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 RAB30Q15771 203 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 LMBRD2Q68DH5 695 aaPredicted RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 KCNT2Q6UVM3 1135 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 SLC39A11Q8N1S5 342 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 TMEM86AQ8N2M4 240 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 TOP6BLQ8N6T0 577 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 SEMA4DQ92854 862 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 IGSF21Q96ID5 467 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 HPDLQ96IR7 371 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 CYP3A43Q9HB55 503 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 SIX2Q9NPC8 291 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 MARCH5Q9NX47 278 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms