RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 HSD3B7Q9H2F3 369 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 GDAP2Q9NXN4 497 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 LIMA1Q9UHB6 759 aaKnown RBP11.03□□□□□ -0.64
HTT-204ENST00000508321 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 DAAM1Q9Y4D1 1078 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 LRRC10BA6NIK2 292 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 KPNA7A9QM74 516 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 HLA-DRAP01903 254 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 ITGB1P05556 798 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 URODP06132 367 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 FAM163BP0C2L3 166 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 CDK11BP21127 795 aaKnown RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 RFX1P22670 979 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 PBX3P40426 434 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 GLUD2P49448 558 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 TNNC1P63316 161 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 NOP14P78316 857 aaKnown RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 GPM6BQ13491 265 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 KRT31Q15323 416 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 USP41Q3LFD5 358 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 ZNF667Q5HYK9 610 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 FKBP15Q5T1M5 1219 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 DPH6Q7L8W6 267 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 LUZP1Q86V48 1076 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 TMEM173Q86WV6 379 aaPredicted RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 TMEM86AQ8N2M4 240 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 PAAF1Q9BRP4 392 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 ZBP1Q9H171 429 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 NGRNQ9NPE2 291 aaKnown RBP11.02□□□□□ -0.65
HTT-204ENST00000508321 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.02□□□□□ -0.65
HTT-204ENST00000508321 RAB20Q9NX57 234 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 LMCD1Q9NZU5 365 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 IRAK3Q9Y616 596 aa11.02□□□□□ -0.65
HTT-204ENST00000508321 CHD7Q9P2D1 2997 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 LGALS16A8MUM7 142 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 DLL1O00548 723 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 SOX1O00570 391 aaPredicted RBP11.01□□□□□ -0.65
HTT-204ENST00000508321 HUS1O60921 280 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CLSTN1O94985 981 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 VNN1O95497 513 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CYP11A1P05108 521 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 TPM3P06753 285 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CTSAP10619 480 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 FGFR3P22607 806 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
HTT-204ENST00000508321 DSG1Q02413 1049 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 SMC1AQ14683 1233 aaKnown RBP11.01□□□□□ -0.65
HTT-204ENST00000508321 FILIP1LQ4L180 1135 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CBWD6Q4V339 395 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CBWD3Q5JTY5 395 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 MIIPQ5JXC2 388 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CBWD5Q5RIA9 395 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 ZNF280DQ6N043 979 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 DSTYKQ6XUX3 929 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 GBP6Q6ZN66 633 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 ANKS3Q6ZW76 656 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CREBRFQ8IUR6 639 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 TAS1R2Q8TE23 839 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 HASPINQ8TF76 798 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 BCL7CQ8WUZ0 217 aaPredicted RBP11.01□□□□□ -0.65
HTT-204ENST00000508321 PIK3R5Q8WYR1 880 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 TTPALQ9BTX7 342 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 DNAI2Q9GZS0 605 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 NIF3L1Q9GZT8 377 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 XYLT2Q9H1B5 865 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 MMRN2Q9H8L6 949 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 CHST7Q9NS84 486 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 GCNT4Q9P109 453 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 MYO9BQ13459 2157 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 COL6A3P12111 3177 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 TRANK1O15050 2925 aa11.01□□□□□ -0.65
HTT-204ENST00000508321 NT5C1B-RDH14C9J2C7 533 aa11□□□□□ -0.65
HTT-204ENST00000508321 H7C4K7 107 aa11□□□□□ -0.65
HTT-204ENST00000508321 PPEF2O14830 753 aa11□□□□□ -0.65
HTT-204ENST00000508321 FSCN2O14926 492 aa11□□□□□ -0.65
HTT-204ENST00000508321 LPXNO60711 386 aa11□□□□□ -0.65
HTT-204ENST00000508321 TACC1O75410 805 aa11□□□□□ -0.65
HTT-204ENST00000508321 C1RP00736 705 aa11□□□□□ -0.65
HTT-204ENST00000508321 TRIM21P19474 475 aaKnown RBP11□□□□□ -0.65
HTT-204ENST00000508321 COPB1P53618 953 aaKnown RBP11□□□□□ -0.65
HTT-204ENST00000508321 MYL6P60660 151 aa11□□□□□ -0.65
HTT-204ENST00000508321 YWHAEP62258 255 aaKnown RBP11□□□□□ -0.65
HTT-204ENST00000508321 YWHAHQ04917 246 aaPredicted RBP11□□□□□ -0.65
HTT-204ENST00000508321 EXOC3L4Q17RC7 722 aa11□□□□□ -0.65
HTT-204ENST00000508321 WDR72Q3MJ13 1102 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms