RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ABLIM3O94929 683 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 WEE2P0C1S8 567 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 ATF2P15336 505 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 ELF1P32519 619 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 TAF6P49848 677 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 SV2CQ496J9 727 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 C12orf56Q8IXR9 622 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 KHSRPQ92945 711 aaKnown RBP eCLIP21.5■■□□□ 1.03
SFXN1-209ENST00000508290 EPHX3Q9H6B9 360 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 AGPAT3Q9NRZ7 376 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.5■■□□□ 1.03
SFXN1-209ENST00000508290 HSPBP1Q9NZL4 362 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 FBXL5Q9UKA1 691 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 ITGA11Q9UKX5 1188 aa21.5■■□□□ 1.03
SFXN1-209ENST00000508290 CIZ1Q9ULV3 898 aaPredicted RBP21.5■■□□□ 1.03
SFXN1-209ENST00000508290 ZFP37Q9Y6Q3 630 aaPredicted RBP21.5■■□□□ 1.03
SFXN1-209ENST00000508290 ADAM12O43184 909 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 HOXD13P35453 343 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 PTPN21Q16825 1174 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 KNOP1Q1ED39 458 aaKnown RBP21.49■■□□□ 1.03
SFXN1-209ENST00000508290 EFCAB13Q8IY85 973 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 TCEAL8Q8IYN2 117 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 LRRC52Q8N7C0 313 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 GLIS3Q8NEA6 775 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 SLC7A14Q8TBB6 771 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 TMEM174Q8WUU8 243 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 MUTYHQ9UIF7 546 aa21.49■■□□□ 1.03
SFXN1-209ENST00000508290 R3HCC1Q9Y3T6 440 aaKnown RBP21.49■■□□□ 1.03
SFXN1-209ENST00000508290 PLXNA3P51805 1871 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 C2CD4DB7Z1M9 353 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 PRPF40AO75400 957 aaKnown RBP21.48■■□□□ 1.03
SFXN1-209ENST00000508290 CYP11A1P05108 521 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 TFAMQ00059 246 aaKnown RBP21.48■■□□□ 1.03
SFXN1-209ENST00000508290 MYBPC2Q14324 1141 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 OVOS1Q6IE37 1185 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 RSPO2Q6UXX9 243 aaPredicted RBP21.48■■□□□ 1.03
SFXN1-209ENST00000508290 KRBA2Q6ZNG9 492 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 XXYLT1Q8NBI6 393 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 EDAQ92838 391 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 SENP8Q96LD8 212 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 PCIF1Q9H4Z3 704 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 SLC39A2Q9NP94 309 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 AFF4Q9UHB7 1163 aaKnown RBP21.48■■□□□ 1.03
SFXN1-209ENST00000508290 CDH22Q9UJ99 828 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 VWA8A3KMH1 1905 aa21.48■■□□□ 1.03
SFXN1-209ENST00000508290 WDR27A2RRH5 827 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 PRR33A8MZF0 331 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 PRRG1O14668 218 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 TGFB1I1O43294 461 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 KLRC4O43908 158 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 TMEM191BP0C7N4 346 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 CASP1P29466 404 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 GUCY2FP51841 1108 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 KMT5BQ4FZB7 885 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 METTL23Q86XA0 190 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 UBALD2Q8IYN6 164 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 GRAMD1CQ8IYS0 662 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 NXPE3Q969Y0 559 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 ANKRD36BP1Q96IX9 119 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 CHAMP1Q96JM3 812 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 SORCS3Q9UPU3 1222 aa21.47■■□□□ 1.03
SFXN1-209ENST00000508290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.46■■□□□ 1.03
SFXN1-209ENST00000508290 GOLGA8IPA6NC78 632 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 GOLGA8JA6NMD2 632 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 ZNF202O95125 648 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 LRG1P02750 347 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 RPN1P04843 607 aaKnown RBP21.46■■□□□ 1.03
SFXN1-209ENST00000508290 CPB1P15086 417 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 SMARCB1Q12824 385 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 MTMR3Q13615 1198 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 SNRNP35Q16560 246 aaKnown RBP21.46■■□□□ 1.03
SFXN1-209ENST00000508290 DUOXA2Q1HG44 320 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 WDR49Q8IV35 697 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 SPATA18Q8TC71 538 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 NOC3LQ8WTT2 800 aaKnown RBP21.46■■□□□ 1.03
SFXN1-209ENST00000508290 IGSF9Q9P2J2 1179 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 EPS15L1Q9UBC2 864 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 HSFX1Q9UBD0 423 aa21.46■■□□□ 1.03
SFXN1-209ENST00000508290 DENND4AQ7Z401 1863 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 KPNA7A9QM74 516 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 RHOBTB3O94955 611 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 TNNC2P02585 160 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 RBP5P82980 135 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 ZXDAP98168 799 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 STK4Q13043 487 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 PLD1Q13393 1074 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 KCNB1Q14721 858 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 THEM5Q8N1Q8 247 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 GTPBP4Q9BZE4 634 aaKnown RBP21.45■■□□□ 1.02
SFXN1-209ENST00000508290 GDPD2Q9HCC8 539 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 PDE11AQ9HCR9 933 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 AVENQ9NQS1 362 aaPredicted RBP21.45■■□□□ 1.02
SFXN1-209ENST00000508290 INTS13Q9NVM9 706 aa21.45■■□□□ 1.02
SFXN1-209ENST00000508290 HOOK1Q9UJC3 728 aaKnown RBP21.45■■□□□ 1.02
SFXN1-209ENST00000508290 MTCL1Q9Y4B5 1905 aaKnown RBP21.45■■□□□ 1.02
SFXN1-209ENST00000508290 PDXKO00764 312 aa21.44■■□□□ 1.02
SFXN1-209ENST00000508290 PPEF2O14830 753 aa21.44■■□□□ 1.02
SFXN1-209ENST00000508290 SPTLC1O15269 473 aa21.44■■□□□ 1.02
SFXN1-209ENST00000508290 ITGB3P05106 788 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms