RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CHN2P52757 468 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ARHGAP4P98171 946 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 IFITM2Q01629 132 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 MED21Q13503 144 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TIGD2Q4W5G0 525 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 VWA3BQ502W6 1294 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 WDR44Q5JSH3 913 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 FAM26DQ5JW98 314 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 RANBP10Q6VN20 620 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 GLRX5Q86SX6 157 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF410Q86VK4 478 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TICAM1Q8IUC6 712 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SPATA2LQ8IUW3 424 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 LINC00301Q8NCQ3 95 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 RSAD2Q8WXG1 361 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SGK3Q96BR1 496 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PAWRQ96IZ0 340 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TUBB6Q9BUF5 446 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 NIFKQ9BYG3 293 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 KLC2Q9H0B6 622 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SP140LQ9H930 580 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 STMN3Q9NZ72 180 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 IGSF9Q9P2J2 1179 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 DOLKQ9UPQ8 538 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 N4BP2Q86UW6 1770 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 TRAV6A0A075B6T7 132 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 BACH1O14867 736 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 HDAC3O15379 428 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 ENTPD5O75356 428 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 OR6B1O95007 311 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 RETP07949 1114 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 PTGS2P35354 604 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 PSEN2P49810 448 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 SSTP61278 116 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 TMPRSS15P98073 1019 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 POU5F1BQ06416 359 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 FCHO2Q0JRZ9 810 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 CLVS2Q5SYC1 327 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 CASKIN2Q8WXE0 1202 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 YME1L1Q96TA2 773 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 TSG101Q99816 390 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 FOXP3Q9BZS1 431 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF696Q9H7X3 374 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 CASS4Q9NQ75 786 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 RRN3Q9NYV6 651 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 UBA2Q9UBT2 640 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 PCDHGA3Q9Y5H0 932 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 MYH6P13533 1939 aa11.38□□□□□ -0.59
PDLIM5-210ENST00000508216 PREX2Q70Z35 1606 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 TSPOAP1O95153 1857 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 LRRC72A6NJI9 287 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 K7EPI3 171 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 OPHN1O60890 802 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 UQCRBP14927 111 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 CDH2P19022 906 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 ECHS1P30084 290 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 CLK3P49761 638 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 DLG4P78352 724 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 APOFQ13790 326 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 HIC1Q14526 733 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 CWF19L2Q2TBE0 894 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 UGT2A3Q6UWM9 527 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF677Q86XU0 584 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 NECAB1Q8N987 351 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 HELQQ8TDG4 1101 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 FAR2Q96K12 515 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 MXD3Q9BW11 206 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 SFMBT1Q9UHJ3 866 aa11.37□□□□□ -0.59
PDLIM5-210ENST00000508216 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CES2O00748 559 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 DCTN3O75935 186 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CLPTM1O96005 669 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 PCSK6P29122 969 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RGS7P49802 495 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ETV1P50549 477 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms