RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CCDC28BQ9BUN5 200 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TEKT3Q9BXF9 490 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 OSBPL1AQ9BXW6 950 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 DCLK3Q9C098 648 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ST6GALNAC4Q9H4F1 302 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 DCLRE1BQ9H816 532 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP39A1Q9NYL5 469 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TAS2R14Q9NYV8 317 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NINJ2Q9NZG7 142 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ADAM22Q9P0K1 906 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CPSF2Q9P2I0 782 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 STOML1Q9UBI4 398 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 FETUBQ9UGM5 382 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC24A2Q9UI40 661 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NOCTQ9UK39 431 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PTPN22Q9Y2R2 807 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CDK5RAP2Q96SN8 1893 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 FOCADQ5VW36 1801 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SBF2Q86WG5 1849 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARFGEF1Q9Y6D6 1849 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 EXOC1LA0A1B0GW35 172 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 A6NHS1 94 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM86B1E9PN63 330 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CLDN3O15551 220 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RAD21O60216 631 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZBED4O75132 1171 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PSMD10O75832 226 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLITRK3O94933 977 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 UPP2O95045 317 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATP5BP06576 529 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 FESP07332 822 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM86B2P0C5J1 330 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 POLR2MP0CAP2 368 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM49P0CI25 452 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM49CP0CI26 452 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 DLATP10515 647 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SKIP12755 728 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 EEF2P13639 858 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SNRPBP14678 240 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP11B1P15538 503 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TSHRP16473 764 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TAC1P20366 129 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MARK3P27448 753 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RXRBP28702 533 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PTPN4P29074 926 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 GPC3P51654 580 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RAD23BP54727 409 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MXRA7P84157 204 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLC1Q07866 573 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 NFIXQ14938 502 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC14Q15048 493 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SIX1Q15475 284 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SEPT7Q16181 437 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC6Q16204 474 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PDK4Q16654 411 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KYNUQ16719 465 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CLEC16AQ2KHT3 1053 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CRY2Q49AN0 593 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CERKLQ49MI3 558 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZC3H12AQ5D1E8 599 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRAPPC3LQ5T215 181 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 C6orf163Q5TEZ5 329 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 HHATQ5VTY9 493 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 IZUMO3Q5VZ72 239 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KRT39Q6A163 491 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 IRGCQ6NXR0 463 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MRPL14Q6P1L8 145 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC174Q6PII3 467 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 OTUD6AQ7L8S5 288 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 OTOP1Q7RTM1 612 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM46Q7Z4K8 759 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCGF5Q86SE9 256 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ERICH1Q86X53 443 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAAF5Q86Y56 855 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ECHDC2Q86YB7 292 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MFN1Q8IWA4 741 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RHOT1Q8IXI2 618 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SRRM1Q8IYB3 904 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KATNAL2Q8IYT4 538 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC116Q8IYX3 515 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARHGAP18Q8N392 663 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIF2BQ8N4N8 673 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RBBP8NLQ8NC74 664 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPFIBP2Q8ND30 876 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ADAM32Q8TC27 787 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC20A1Q8WUM9 679 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PSPC1Q8WXF1 523 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAJC9Q8WXX5 260 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SHC3Q92529 594 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ERP27Q96DN0 273 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ITPKCQ96DU7 683 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 DYDC2Q96IM9 177 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 RBM41Q96IZ5 413 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 VCPIP1Q96JH7 1222 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 NUDCD1Q96RS6 583 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KCTD15Q96SI1 283 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TSC22D3Q99576 134 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms