RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 PADI3Q9ULW8 664 aa13.5□□□□□ -0.25
SIL1-209ENST00000507002 UBQLN1Q9UMX0 589 aaKnown RBP13.5□□□□□ -0.25
SIL1-209ENST00000507002 CAPN6Q9Y6Q1 641 aa13.5□□□□□ -0.25
SIL1-209ENST00000507002 NCANO14594 1321 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
SIL1-209ENST00000507002 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
SIL1-209ENST00000507002 RTN2O75298 545 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 WEE2P0C1S8 567 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 TMEM253P0C7T8 217 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 CKBP12277 381 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 P4HA1P13674 534 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
SIL1-209ENST00000507002 CD58P19256 250 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 DSC3Q14574 896 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 WDR72Q3MJ13 1102 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 TRIM58Q8NG06 486 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
SIL1-209ENST00000507002 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
SIL1-209ENST00000507002 TDRD15B5MCY1 1934 aaKnown RBP13.49□□□□□ -0.25
SIL1-209ENST00000507002 A0A0A6YYK5 440 aaPredicted RBP13.48□□□□□ -0.25
SIL1-209ENST00000507002 BUB1O43683 1085 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 MGEA5O60502 916 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 CD4P01730 458 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 FTLP02792 175 aaPredicted RBP13.48□□□□□ -0.25
SIL1-209ENST00000507002 GZMAP12544 262 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 ITGA4P13612 1032 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 GNA15P30679 374 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 CDK7P50613 346 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
SIL1-209ENST00000507002 TNNC1P63316 161 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 CLEC16AQ2KHT3 1053 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
SIL1-209ENST00000507002 SDCBP2Q9H190 292 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 RNF19AQ9NV58 838 aa13.48□□□□□ -0.25
SIL1-209ENST00000507002 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 ANKRD62A6NC57 917 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 PPEF2O14830 753 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 THAP12O43422 761 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 ABCB4P21439 1286 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 RAB27AP51159 221 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 TERF1P54274 439 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 IFI16Q16666 785 aaKnown RBP13.47□□□□□ -0.25
SIL1-209ENST00000507002 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 TRIM72Q6ZMU5 477 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 MRPL10Q7Z7H8 261 aaKnown RBP13.47□□□□□ -0.25
SIL1-209ENST00000507002 FAM126BQ8IXS8 530 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 RFFLQ8WZ73 363 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
SIL1-209ENST00000507002 PUF60Q9UHX1 559 aaKnown RBP13.47□□□□□ -0.25
SIL1-209ENST00000507002 FAM170AA1A519 330 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 GRID2IPA4D2P6 1211 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 MEIS3P2A8K0S8 358 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 PTGESO14684 152 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ZNF623O75123 536 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ATP1A1P05023 1023 aaKnown RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 CYP3A5P20815 502 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 NOP2P46087 812 aaKnown RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 CDH8P55286 799 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 MBTPS1Q14703 1052 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ZNF394Q53GI3 561 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ACAD10Q6JQN1 1059 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 CTU1Q7Z7A3 348 aaKnown RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 LPPQ93052 612 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 ADAM2Q99965 735 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 THAP2Q9H0W7 228 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 FAM124BQ9H5Z6 455 aaPredicted RBP13.46□□□□□ -0.25
SIL1-209ENST00000507002 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 MRFAP1Q9Y605 127 aa13.46□□□□□ -0.25
SIL1-209ENST00000507002 TANC1Q9C0D5 1861 aa13.46□□□□□ -0.26
SIL1-209ENST00000507002 PIRO00625 290 aa13.45□□□□□ -0.26
SIL1-209ENST00000507002 ENC1O14682 589 aa13.45□□□□□ -0.26
SIL1-209ENST00000507002 CILPO75339 1184 aa13.45□□□□□ -0.26
SIL1-209ENST00000507002 PALMO75781 387 aa13.45□□□□□ -0.26
SIL1-209ENST00000507002 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms