RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 IGSF21Q96ID5 467 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 ANKRD36BP1Q96IX9 119 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 BPIFA3Q9BQP9 254 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TUBGCP2Q9BSJ2 902 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC38A7Q9NVC3 462 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 ANO9A1A5B4 782 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 C2CD2LO14523 706 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 IKBKBO14920 756 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 HCRTO43612 131 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 FGF18O76093 207 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 GNA14O95837 355 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 NUDT7P0C024 238 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 LAG3P18627 525 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 LRPAP1P30533 357 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 FMO5P49326 533 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 KLK7P49862 253 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 LILRA4P59901 499 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 ERVK-21P61565 698 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 CLDN10P78369 228 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 NCOA4Q13772 614 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 DSG2Q14126 1118 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 GRIN2CQ14957 1233 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 SURF1Q15526 300 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 ZACNQ401N2 412 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 HABP4Q5JVS0 413 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 DCLRE1AQ6PJP8 1040 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 C15orf39Q6ZRI6 1047 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 APTXQ7Z2E3 356 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 CEP57Q86XR8 500 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 TATDN2Q93075 761 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 NAP1L5Q96NT1 182 aaPredicted RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 COLEC11Q9BWP8 271 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 PRDM12Q9H4Q4 367 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF576Q9H609 170 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 APOBEC3GQ9HC16 384 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 SPG21Q9NZD8 308 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 DERAQ9Y315 318 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
SCAMP1-202ENST00000506858 TEX33O43247 280 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 AP5Z1O43299 807 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 AFPP02771 609 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 CYP3A5P20815 502 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 IRS1P35568 1242 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 RAP1GAPP47736 663 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 MXI1P50539 228 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 COPB1P53618 953 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 CDH8P55286 799 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 ERVFC1P60507 584 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 RBP5P82980 135 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 MYL7Q01449 175 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 POU5F1Q01860 360 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 GPM6BQ13491 265 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 TRPC3Q13507 836 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 CAMK1Q14012 370 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 VWA3BQ502W6 1294 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 GJB7Q6PEY0 223 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 SCARA5Q6ZMJ2 495 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 GPIHBP1Q8IV16 184 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 SPPL3Q8TCT6 385 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 HPDLQ96IR7 371 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 TMEM175Q9BSA9 504 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 TMEM8AQ9HCN3 771 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 ADAM28Q9UKQ2 775 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 PRUNE2Q8WUY3 3088 aa9.51□□□□□ -0.89
SCAMP1-202ENST00000506858 PRRC2BQ5JSZ5 2229 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 A0A1W2PPC1 479 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 GOLGA6L19H0YKK7 550 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 XPOTO43592 962 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 RPL17P18621 184 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 SLC9A1P19634 815 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 CA8P35219 290 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 CCDC142Q17RM4 750 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 KRT39Q6A163 491 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 FUT10Q6P4F1 479 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 DSTYKQ6XUX3 929 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 FAM114A1Q8IWE2 563 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 VPS52Q8N1B4 723 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 POF1BQ8WVV4 589 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 RSPH1Q8WYR4 309 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 KAT5Q92993 513 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms