RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PSMD2Q13200 908 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 BMT2Q1RMZ1 405 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 HS2ST1Q7LGA3 356 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 PPFIBP1Q86W92 1011 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 BRSK2Q8IWQ3 736 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 GPD1LQ8N335 351 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 KIAA0895Q8NCT3 520 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 ASB7Q9H672 318 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 AGPAT3Q9NRZ7 376 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 RBAKQ9NYW8 714 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 HSPBP1Q9NZL4 362 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 CFAP54Q96N23 3096 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 RIF1Q5UIP0 2472 aaKnown RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 DENND4AQ7Z401 1863 aa14.21□□□□□ -0.14
TCOF1-209ENST00000506630 DOCK6Q96HP0 2047 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 KIAA0391O15091 583 aaKnown RBP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 CLIC2O15247 247 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 TEX28O15482 410 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 EXTL3O43909 919 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 IL18RAPO95256 599 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 ADH1AP07327 375 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 AOC1P19801 751 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 CYP3A5P20815 502 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 TKTP29401 623 aaKnown RBP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 LRPAP1P30533 357 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 CYP2J2P51589 502 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 POU5F1Q01860 360 aaKnown RBP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 SNW1Q13573 536 aaKnown RBP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 PSMD5Q16401 504 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 CD300LGQ6UXG3 332 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 OTOP3Q7RTS5 596 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 ENGASEQ8NFI3 743 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 TSPAN18Q96SJ8 248 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 RTP3Q9BQQ7 232 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.2□□□□□ -0.14
TCOF1-209ENST00000506630 FBXL21Q9UKT6 434 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 DERAQ9Y315 318 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 SPTBN4Q9H254 2564 aa14.2□□□□□ -0.14
TCOF1-209ENST00000506630 TGFB1I1O43294 461 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 GADD45BO75293 160 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-209ENST00000506630 RHOBTB3O94955 611 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 GLUD1P00367 558 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 CLCN4P51793 760 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 PNOCQ13519 176 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 TDGQ13569 410 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 ZBTB6Q15916 424 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 KNOP1Q1ED39 458 aaKnown RBP14.19□□□□□ -0.14
TCOF1-209ENST00000506630 SPATA1Q5VX52 437 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 TMC5Q6UXY8 1006 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 RXFP1Q9HBX9 757 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 C2CD2Q9Y426 696 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 FAM186AA6NE01 2351 aa14.19□□□□□ -0.14
TCOF1-209ENST00000506630 PPEF2O14830 753 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 KINO60870 393 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 KIF20AO95235 890 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 FGFR3P22607 806 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 WNT7BP56706 349 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 TFAMQ00059 246 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 KCNB1Q14721 858 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 ANGPT1Q15389 498 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 CWF19L1Q69YN2 538 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 PDXDC1Q6P996 788 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 PALB2Q86YC2 1186 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 NT5DC4Q86YG4 428 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 CBWD2Q8IUF1 395 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 CCDC105Q8IYK2 499 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 DTWD2Q8NBA8 298 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 LNX1Q8TBB1 728 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 SFXN1Q9H9B4 322 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 DPP3Q9NY33 737 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 FNIP2Q9P278 1114 aa14.18□□□□□ -0.14
TCOF1-209ENST00000506630 CGNQ9P2M7 1197 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
TCOF1-209ENST00000506630 ZNF233A6NK53 670 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 SYN3O14994 580 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 PI15O43692 258 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 C9orf57Q5W0N0 161 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 LMBRD2Q68DH5 695 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-209ENST00000506630 DSTYKQ6XUX3 929 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 ANKS3Q6ZW76 656 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 GPR149Q86SP6 731 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 XXYLT1Q8NBI6 393 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 GOLGA5Q8TBA6 731 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
TCOF1-209ENST00000506630 ERCC4Q92889 916 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-209ENST00000506630 SUSD3Q96L08 255 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 SEMA4AQ9H3S1 761 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms