RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PALB2Q86YC2 1186 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 WDR49Q8IV35 697 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 POP1Q99575 1024 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 CGRRF1Q99675 332 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 APOL5Q9BWW9 433 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 CDH22Q9UJ99 828 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 BACE2Q9Y5Z0 518 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 TMEM191BP0C7N4 346 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 SPATA31D3P0C874 917 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 DLATP10515 647 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 MYBPC2Q14324 1141 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 CAMK4Q16566 473 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 SPATA31D4Q6ZUB0 917 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 C12orf76Q8N812 135 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 CACTINQ8WUQ7 758 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 CCDC127Q96BQ5 260 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 BORCS6Q96GS4 357 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 SENP8Q96LD8 212 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 MAN1C1Q9NR34 630 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 DZANK1Q9NVP4 752 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 USP15Q9Y4E8 981 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 TIMM13Q9Y5L4 95 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 CDY1Q9Y6F8 540 aa19.7■□□□□ 0.74
PDLIM7-216ENST00000506537 CD44P16070 742 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 HOXB8P17481 243 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 NR2F2P24468 414 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 OR1D2P34982 312 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 TAF6P49848 677 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 MORC3Q14149 939 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 PUS10Q3MIT2 529 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 DSTYKQ6XUX3 929 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 ADSSL1Q8N142 457 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 APPL2Q8NEU8 664 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 SUSD6Q92537 303 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 ZNF516Q92618 1163 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 GBP4Q96PP9 640 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 AGAP1Q9UPQ3 857 aa19.69■□□□□ 0.74
PDLIM7-216ENST00000506537 MTCL1Q9Y4B5 1905 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 TTC28Q96AY4 2481 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 LRRIQ3A6PVS8 624 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 BIN1O00499 593 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 PMS1P54277 932 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 RAB33AQ14088 237 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 SMAD2Q15796 467 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 DUOXA2Q1HG44 320 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 RARS2Q5T160 578 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 CEP135Q66GS9 1140 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 CENPPQ6IPU0 288 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 SLC8B1Q6J4K2 584 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 CSGALNACT2Q8N6G5 542 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 ADAMTS19Q8TE59 1207 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 PARD3BQ8TEW8 1205 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 ZNF560Q96MR9 790 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 NECAB3Q96P71 396 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 FNBP1Q96RU3 617 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 FBXL5Q9UKA1 691 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 FBXW11Q9UKB1 542 aa19.68■□□□□ 0.74
PDLIM7-216ENST00000506537 H7C4K7 107 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 AKAP3O75969 853 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 C1RP00736 705 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 TNNC2P02585 160 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 ODC1P11926 461 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 TNNI1P19237 187 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 TYMPP19971 482 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 PAX3P23760 479 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 DLG4P78352 724 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 EDRF1Q3B7T1 1238 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 SV2CQ496J9 727 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 CTXN3Q4LDR2 81 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 ZNF280DQ6N043 979 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 TRAPPC11Q7Z392 1133 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 LRRC52Q8N7C0 313 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 KREMEN2Q8NCW0 462 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 GTPBP4Q9BZE4 634 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 CLSTN2Q9H4D0 955 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 SFXN1Q9H9B4 322 aa19.67■□□□□ 0.74
PDLIM7-216ENST00000506537 C2orf16Q68DN1 1984 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 MUC3AQ02505 3323 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 TRIM49BA6NDI0 452 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 KPNA7A9QM74 516 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 PPP1R3GB7ZBB8 358 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 CYB561D2O14569 222 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 RFPL2O75678 378 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 OAZ2O95190 189 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 CYP11A1P05108 521 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 KRT19P08727 400 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 WEE2P0C1S8 567 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 PNPLA4P41247 253 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 CLDN10P78369 228 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 RBP5P82980 135 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 ROR1Q01973 937 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 YWHAHQ04917 246 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 C1orf220Q5T0J3 134 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 TMC5Q6UXY8 1006 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 ZC3H3Q8IXZ2 948 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 EEF2KMTQ96G04 330 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 ADAM7Q9H2U9 754 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms