RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MTMR12Q9C0I1 747 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 DSEQ9UL01 958 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 FRMD4BQ9Y2L6 1034 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 CDY1Q9Y6F8 540 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 PPEF2O14830 753 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 ITGB3P05106 788 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 IGFBP6P24592 240 aaPredicted RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 RPL13P26373 211 aaKnown RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 OR1D2P34982 312 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 PPP1R2P41236 205 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 MTHFRP42898 656 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 WNT7BP56706 349 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 STIM1Q13586 685 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 RAB33AQ14088 237 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CBX2Q14781 532 aaPredicted RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 DUOXA2Q1HG44 320 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 COBLL1Q53SF7 1204 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 RARS2Q5T160 578 aaKnown RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 SLC8B1Q6J4K2 584 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CYP26C1Q6V0L0 522 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 C15orf39Q6ZRI6 1047 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CLEC17AQ6ZS10 378 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 PALB2Q86YC2 1186 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 RDH13Q8NBN7 331 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 KREMEN2Q8NCW0 462 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 SUSD6Q92537 303 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 COL25A1Q9BXS0 654 aaPredicted RBP18.01■□□□□ 0.47
SNCA-209ENST00000506244 S1PR5Q9H228 398 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 INTS13Q9NVM9 706 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 ZDHHC7Q9NXF8 308 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 FBXW11Q9UKB1 542 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 PCDHA5Q9Y5H7 936 aa18.01■□□□□ 0.47
SNCA-209ENST00000506244 KRT19P08727 400 aa18■□□□□ 0.47
SNCA-209ENST00000506244 DLATP10515 647 aaKnown RBP18■□□□□ 0.47
SNCA-209ENST00000506244 TNNI1P19237 187 aa18■□□□□ 0.47
SNCA-209ENST00000506244 POLR2BP30876 1174 aaKnown RBP18■□□□□ 0.47
SNCA-209ENST00000506244 RBP5P82980 135 aa18■□□□□ 0.47
SNCA-209ENST00000506244 RTL10Q7L3V2 364 aa18■□□□□ 0.47
SNCA-209ENST00000506244 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
SNCA-209ENST00000506244 C1orf127Q8N9H9 656 aa18■□□□□ 0.47
SNCA-209ENST00000506244 TSG101Q99816 390 aa18■□□□□ 0.47
SNCA-209ENST00000506244 RHOBTB2Q9BYZ6 727 aa18■□□□□ 0.47
SNCA-209ENST00000506244 DMAC2Q9NW81 257 aa18■□□□□ 0.47
SNCA-209ENST00000506244 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
SNCA-209ENST00000506244 TCF20Q9UGU0 1960 aaKnown RBP17.99■□□□□ 0.47
SNCA-209ENST00000506244 OR6C75A6NL08 312 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 MAPK13O15264 365 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 OAZ2O95190 189 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 NR2F2P24468 414 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 AP3M2P53677 418 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 MYO1EQ12965 1108 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 MRPL58Q14197 206 aaKnown RBP17.99■□□□□ 0.47
SNCA-209ENST00000506244 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 OVOS1Q6IE37 1185 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 LILRA6Q6PI73 481 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 CCDC149Q6ZUS6 474 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 METTL23Q86XA0 190 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 MFSD14AQ96MC6 490 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 APOL5Q9BWW9 433 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 PHF7Q9BWX1 381 aaPredicted RBP17.99■□□□□ 0.47
SNCA-209ENST00000506244 FBXL5Q9UKA1 691 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 AGAP1Q9UPQ3 857 aa17.99■□□□□ 0.47
SNCA-209ENST00000506244 TSC2P49815 1807 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 VCANP13611 3396 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 KPNA7A9QM74 516 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 SPTLC1O15269 473 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 CYP11A1P05108 521 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 HNRNPA1P09651 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
SNCA-209ENST00000506244 CPB1P15086 417 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 HOXA9P31269 272 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 ROR1Q01973 937 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 ZP2Q05996 745 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 CEP135Q66GS9 1140 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 TPGS2Q68CL5 300 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 LMBRD2Q68DH5 695 aaPredicted RBP17.98■□□□□ 0.47
SNCA-209ENST00000506244 TMC5Q6UXY8 1006 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 GPR149Q86SP6 731 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 SMYD4Q8IYR2 804 aaPredicted RBP17.98■□□□□ 0.47
SNCA-209ENST00000506244 TMEM130Q8N3G9 435 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 MAFFQ9ULX9 164 aa17.98■□□□□ 0.47
SNCA-209ENST00000506244 MTCL1Q9Y4B5 1905 aaKnown RBP17.98■□□□□ 0.47
SNCA-209ENST00000506244 TTC28Q96AY4 2481 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 DLL1O00548 723 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 CYB561D2O14569 222 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 PSMA7O14818 248 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 ADAM12O43184 909 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 TBC1D4O60343 1298 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 ZMYND10O75800 440 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 C8AP07357 584 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 ELF1P32519 619 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 SSTR3P32745 418 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms