RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 VPS53Q5VIR6 699 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 C1QL3Q5VWW1 255 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 TSHZ3Q63HK5 1081 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 TRIM68Q6AZZ1 485 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ZSCAN25Q6NSZ9 544 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 CEP85Q6P2H3 762 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 FBXL19Q6PCT2 694 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 PDZD4Q76G19 769 aaPredicted RBP3.78□□□□□ -1.8
TCOF1-208ENST00000506063 RABEPKQ7Z6M1 372 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ZC3H18Q86VM9 953 aaKnown RBP3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ERC1Q8IUD2 1116 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 YAF2Q8IY57 180 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 MMP21Q8N119 569 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF710Q8N1W2 664 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 SMARCC2Q8TAQ2 1214 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 FAM200AQ8TCP9 573 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 HASPINQ8TF76 798 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ACDQ96AP0 544 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 PGBD4Q96DM1 585 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 CDHR1Q96JP9 859 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 SEMA3CQ99985 751 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 COLEC11Q9BWP8 271 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 IFT122Q9HBG6 1241 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 KCNH7Q9NS40 1196 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 TM7SF3Q9NS93 570 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 OBP2AQ9NY56 170 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 MMP17Q9ULZ9 603 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.78□□□□□ -1.8
TCOF1-208ENST00000506063 PCDHGB2Q9Y5G2 931 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 MAFBQ9Y5Q3 323 aaPredicted RBP3.78□□□□□ -1.8
TCOF1-208ENST00000506063 INSL5Q9Y5Q6 135 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 CDY1Q9Y6F8 540 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 CSPG4Q6UVK1 2322 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 SF3B1O75533 1304 aaKnown RBP eCLIP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DCHS2Q6V1P9 2916 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 A0A087WZ62 844 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 IGKV6-21A0A0C4DH24 114 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 A0A1W2PRU2 124 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PALM3A6NDB9 673 aaPredicted RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MAGEB2O15479 319 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MAFGO15525 162 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DHX15O43143 795 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ADAM23O75077 832 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DXOO77932 396 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 VNN2O95498 520 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 LRG1P02750 347 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PRF1P14222 555 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 JUPP14923 745 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ARSAP15289 507 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ATF2P15336 505 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 WEE1P30291 646 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PCBP4P57723 403 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PLCB2Q00722 1185 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ROR1Q01973 937 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 SLFN5Q08AF3 891 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MESP2Q0VG99 397 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DDX10Q13206 875 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 RUNX3Q13761 415 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 HSP90AA2PQ14568 343 aaPredicted RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 TARBP2Q15633 366 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 NAB2Q15742 525 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 GAB4Q2WGN9 574 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 HES3Q5TGS1 186 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 FAM171A1Q5VUB5 890 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 SLC8B1Q6J4K2 584 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 GAREM2Q75VX8 874 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DGKHQ86XP1 1220 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 TBC1D10CQ8IV04 446 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 SFTPA1Q8IWL2 248 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 TCEAL8Q8IYN2 117 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 TRMT2AQ8IZ69 625 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 CLASRPQ8N2M8 674 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 TMEM57Q8N5G2 664 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 C1orf216Q8TAB5 229 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF461Q8TAF7 563 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 BPIFB1Q8TDL5 484 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 RHBDD1Q8TEB9 315 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 NLRP7Q8WX94 980 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DDX27Q96GQ7 796 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF419Q96HQ0 510 aaPredicted RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PIGSQ96S52 555 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MAP7D2Q96T17 732 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 P2RY13Q9BPV8 354 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 FDXACB1Q9BRP7 624 aaPredicted RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ZKSCAN3Q9BRR0 538 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 EIF2AQ9BY44 585 aaKnown RBP3.77□□□□□ -1.81
TCOF1-208ENST00000506063 NACAP1Q9BZK3 213 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ZDHHC5Q9C0B5 715 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 DNAJC25Q9H1X3 360 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 CXCL16Q9H2A7 254 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 EBF3Q9H4W6 596 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 RIOX1Q9H6W3 641 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 GAREM1Q9H706 876 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MINDY3Q9H8M7 445 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 CD248Q9HCU0 757 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 CD93Q9NPY3 652 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ASCL3Q9NQ33 180 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 GKN1Q9NS71 199 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 MAD2L2Q9UI95 211 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms