RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CLTAP09496 248 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TCF4P15884 667 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ACO1P21399 889 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 BACE1P56817 501 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 NOMO3P69849 1222 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CLDN10P78369 228 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 MIS18BP1Q6P0N0 1132 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 XRRA1Q6P2D8 792 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 OR5B17Q8NGF7 314 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 DEPTORQ8TB45 409 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TCP11Q8WWU5 503 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 JDP2Q8WYK2 163 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 RBM15Q96T37 977 aaKnown RBP eCLIP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 PAIP2Q9BPZ3 127 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF148Q9UQR1 794 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 USP15Q9Y4E8 981 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 PSTPIP1O43586 416 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZSCAN5DPP0CG00 497 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 STX2P32856 288 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 RTP1P59025 263 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ELF3P78545 371 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 NFX1Q12986 1120 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 XKR3Q5GH77 459 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 CCDC91Q7Z6B0 441 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 FAM228AQ86W67 206 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 KATNAL2Q8IYT4 538 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 GPATCH11Q8N954 259 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 GLIS1Q8NBF1 620 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF526Q8TF50 670 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ACSF2Q96CM8 615 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 MRRFQ96E11 262 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 PARVAQ9NVD7 372 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 SLC12A4Q9UP95 1085 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 NEU2Q9Y3R4 380 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 RASA4BC9J798 803 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 H0YCG3 227 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 RASA4O43374 803 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 UBOX5O94941 541 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ETS1P14921 441 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ATP4AP20648 1035 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 GLRA2P23416 452 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 MAGEA4P43358 317 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 NOP14P78316 857 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 PLCB3Q01970 1234 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 E2F5Q15329 346 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 GNPTABQ3T906 1256 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 CCDC63Q8NA47 563 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 EXD1Q8NHP7 514 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 FEZF2Q8TBJ5 459 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF606Q8WXB4 792 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 TBC1D31Q96DN5 1066 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 CCDC77Q9BR77 488 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 ADAM33Q9BZ11 813 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 NKIRAS1Q9NYS0 192 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 BAIAP2L1Q9UHR4 511 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 DNPEPQ9ULA0 475 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 AGAP1Q9UPQ3 857 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 SCINQ9Y6U3 715 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 PCNTO95613 3336 aa8.08□□□□□ -1.12
PPARGC1A-204ENST00000506055 SPATA31C2B4DYI2 1134 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 F8VP50 259 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 MGRN1O60291 552 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 CDH16O75309 829 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 SUN1O94901 812 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 CST3P01034 146 aaPredicted RBP8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 SUPT20HL2P0C7V6 817 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 CETN2P41208 172 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 FSTL1Q12841 308 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 PTP4A2Q12974 167 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 NCOA4Q13772 614 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 TMED2Q15363 201 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 SUPT20HL1Q3ZLR7 823 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 PLEKHA7Q6IQ23 1121 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZBTB33Q86T24 672 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 DHX37Q8IY37 1157 aaKnown RBP8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 BBOF1Q8ND07 529 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 CKAP2Q8WWK9 683 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 SLC7A3Q8WY07 619 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 CDHR1Q96JP9 859 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 MCEEQ96PE7 176 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 WRNIP1Q96S55 665 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 TCHPQ9BT92 498 aa8.07□□□□□ -1.12
PPARGC1A-204ENST00000506055 SAYSD1Q9NPB0 183 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms