RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SMPD1P17405 629 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 RRM1P23921 792 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 DR1Q01658 176 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 PTPROQ16827 1216 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 SEZ6Q53EL9 994 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 EEF1DP3Q658K8 133 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 SH3GL2Q99962 352 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 FDXACB1Q9BRP7 624 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 XYLT2Q9H1B5 865 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 B4GALT5O43286 388 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 STAG3L1P0CL83 205 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 MMP8P22894 467 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 HLTFQ14527 1009 aaKnown RBP eCLIP18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 ZNF667Q5HYK9 610 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 SLC13A5Q86YT5 568 aaPredicted RBP18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 CPA5Q8WXQ8 436 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 KRT35Q92764 455 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 BCO2Q9BYV7 579 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 AMACRQ9UHK6 382 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 ZHX1Q9UKY1 873 aaPredicted RBP18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 STRIP2Q9ULQ0 834 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 DERAQ9Y315 318 aa18.39■□□□□ 0.54
TRAPPC11-204ENST00000505676 SYF2O95926 243 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 ITGA4P13612 1032 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 MORN1Q5T089 497 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 TMEM63BQ5T3F8 832 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 LRIG3Q6UXM1 1119 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 MINDY3Q9H8M7 445 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 VPS18Q9P253 973 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 IP6K2Q9UHH9 426 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 ITGA11Q9UKX5 1188 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 Q9Y3F1 56 aa18.39■□□□□ 0.53
TRAPPC11-204ENST00000505676 UMODL1Q5DID0 1318 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 NRCAMQ92823 1304 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 ZNF286BP0CG31 522 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 CETN2P41208 172 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 ASPAP45381 313 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 CFAP58Q5T655 872 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 NLRP7Q8WX94 980 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 SLCO2A1Q92959 643 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 TSPAN18Q96SJ8 248 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 A6NJR5 290 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 A6NNZ2 444 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 GPR25O00155 361 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 RNF40O75150 1001 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 GGCXP38435 758 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 TUBB8Q3ZCM7 444 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 SYDE1Q6ZW31 735 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 RHOT1Q8IXI2 618 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 PTPN18Q99952 460 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 ERP44Q9BS26 406 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 ADAM21Q9UKJ8 722 aa18.38■□□□□ 0.53
TRAPPC11-204ENST00000505676 A0A1B0GUA9 196 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 FSCN2O14926 492 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 CXCL8P10145 99 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 ZNF211Q13398 564 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 FEZF2Q8TBJ5 459 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 SCLT1Q96NL6 688 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAN1Q9Y2M0 1017 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 SMIM35A0A1B0GVV1 85 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 AGPSO00116 658 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 TTI1O43156 1089 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 GJB1P08034 283 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 PYGMP11217 842 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 ARF4P18085 180 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 GRM5P41594 1212 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 GSCP56915 257 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 INHBEP58166 350 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 MRPS25P82663 173 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 MKRN3Q13064 507 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 LRRC38Q5VT99 294 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 IQCKQ8N0W5 287 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 MAGOHBQ96A72 148 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 GCOM2Q9BZD3 368 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 LRRC19Q9H756 370 aa18.37■□□□□ 0.53
TRAPPC11-204ENST00000505676 ESYT3A0FGR9 886 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 LACTBL1A8MY62 500 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 TSPAN1O60635 241 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 F2P00734 622 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 IQCF3P0C7M6 154 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 AXLP30530 894 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 LACTBP83111 547 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 DUPD1Q68J44 220 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 PRELID2Q8N945 189 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 NPLOC4Q8TAT6 608 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms