RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 NAB2Q15742 525 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 RILPL1Q5EBL4 403 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 UNQ6494/PRO21346Q6UXR6 183 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 ANKS3Q6ZW76 656 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 PDZD4Q76G19 769 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 CEP120Q8N960 986 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 PLIN2Q99541 437 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 ACO2Q99798 780 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 CDT1Q9H211 546 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 VWA3AA6NCI4 1184 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 C1QTNF9BB2RNN3 333 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 PRRG1O14668 218 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 SLC16A4O15374 487 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 TRAPPC3O43617 180 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 KCNK5O95279 499 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 C1QTNF9P0C862 333 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 GJB2P29033 226 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 GRM5P41594 1212 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 MATR3P43243 847 aaKnown RBP eCLIP17.5■□□□□ 0.395e-11■■■□□ 18.9
PDLIM7-213ENST00000505074 STRN3Q13033 797 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 IL17AQ16552 155 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 DAW1Q8N136 415 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 ZNF461Q8TAF7 563 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 CSGALNACT1Q8TDX6 532 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 LOXL4Q96JB6 756 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 UROC1Q96N76 676 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 PPP1R10Q96QC0 940 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 TARS2Q9BW92 718 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
PDLIM7-213ENST00000505074 CITO14578 2027 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 SFI1A8K8P3 1242 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 I3L4J1 428 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 CCDC6Q16204 474 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 CYP4A22Q5TCH4 519 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 KCNK18Q7Z418 384 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 WDR5BQ86VZ2 330 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 LSM14BQ9BX40 385 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 TMEM134Q9H6X4 195 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 RXFP3Q9NSD7 469 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 RBM12Q9NTZ6 932 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 SLC38A7Q9NVC3 462 aa17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-213ENST00000505074 SMIM28A0A1B0GU29 152 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 NRG2O14511 850 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 TKTP29401 623 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 HOXA6P31267 233 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 BRCC3P46736 316 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 SMTNP53814 917 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 DGKKQ5KSL6 1271 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 MPZL3Q6UWV2 235 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 C1orf186Q6ZWK4 172 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 MFSD6LQ8IWD5 586 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 KDF1Q8NAX2 398 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 ACAP3Q96P50 834 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 C8orf33Q9H7E9 229 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 C17orf75Q9HAS0 396 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 ARHGAP28Q9P2N2 729 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
PDLIM7-213ENST00000505074 FRYQ5TBA9 3013 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 PODXLO00592 558 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 EPN2O95208 641 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 MCF2P10911 925 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 IGFBP6P24592 240 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 VIPR2P41587 438 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 KPNA1P52294 538 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 ROR1Q01973 937 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 MAPK7Q13164 816 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 UPP1Q16831 310 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 IQCEQ6IPM2 695 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 PSAPL1Q6NUJ1 521 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 Q6ZS52 159 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 YAF2Q8IY57 180 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 ELMOD1Q8N336 334 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 RASSF8Q8NHQ8 419 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 ZSCAN18Q8TBC5 510 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 BICD1Q96G01 975 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 ZSWIM3Q96MP5 696 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 CYP4F11Q9HBI6 524 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 NUB1Q9Y5A7 615 aa17.47■□□□□ 0.39
PDLIM7-213ENST00000505074 CEP295Q9C0D2 2601 aa17.46■□□□□ 0.39
PDLIM7-213ENST00000505074 ABLIM3O94929 683 aa17.46■□□□□ 0.39
PDLIM7-213ENST00000505074 ATF2P15336 505 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms