RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	PSMC6	P62333	389 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KRT72	Q14CN4	511 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CBWD6	Q4V339	395 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CBWD3	Q5JTY5	395 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CFAP157	Q5JU67	520 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CBWD5	Q5RIA9	395 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RINL	Q6ZS11	566 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ETNPPL	Q8TBG4	499 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	NMD3	Q96D46	503 aa	Known RBP	18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TRAIP	Q9BWF2	469 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PLVAP	Q9BX97	442 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	NPHS2	Q9NP85	383 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TROVE2	P10155	538 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	BCR	P11274	1271 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GZMA	P12544	262 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ADAR	P55265	1226 aa	Known RBP	18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZNF543	Q08ER8	600 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MESD	Q14696	234 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TMED2	Q15363	201 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RBM26	Q5T8P6	1007 aa	Known RBP	18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ADGRF4	Q8IZF3	695 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GRK7	Q8WTQ7	553 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TTC25	Q96NG3	672 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DMAC2	Q9NW81	257 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CFAP69	A5D8W1	941 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FOXN3	O00409	490 aa	Predicted RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	OPHN1	O60890	802 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RARB	P10826	455 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	IDO1	P14902	403 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MYL7	Q01449	175 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PHLDB2	Q86SQ0	1253 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SATL1	Q86VE3	508 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DIS3L	Q8TF46	1054 aa	Known RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PSPC1	Q8WXF1	523 aa	Known RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZNF75CP	Q92670	426 aa	Predicted RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	NDE1	Q9NXR1	346 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CLIC5	Q9NZA1	410 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ANKFY1	Q9P2R3	1169 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ASIC3	Q9UHC3	531 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	IGKV6D-41	A0A0C4DH26	115 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TMEM110-MUSTN1	A8MSY1	372 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RGL2	O15211	777 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MAGEC1	O60732	1142 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GAS8	O95995	478 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	HARS	P12081	509 aa	Known RBP	18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	B3GNT6	Q6ZMB0	384 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TXNRD3	Q86VQ6	643 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	LMO3	Q8TAP4	145 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SLC20A1	Q8WUM9	679 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RUSC1	Q9BVN2	902 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TIMMDC1	Q9NPL8	285 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	JAG2	Q9Y219	1238 aa		18.85	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CDK5RAP2	Q96SN8	1893 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RSPH10B2	B2RC85	870 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZBTB5	O15062	677 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CYP1A2	P05177	515 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RSPH10B	P0C881	870 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	YY1	P25490	414 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PGM1	P36871	562 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ITGA8	P53708	1063 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KCNA1	Q09470	495 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CYLC2	Q14093	348 aa	Predicted RBP	18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SGO2	Q562F6	1265 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TDRP	Q86YL5	185 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CRYGN	Q8WXF5	182 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SETDB2	Q96T68	719 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FOXP3	Q9BZS1	431 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TRABD	Q9H4I3	376 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	EBF3	Q9H4W6	596 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DNAJC17	Q9NVM6	304 aa	Known RBP	18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SENP1	Q9P0U3	644 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FGFR1	P11362	822 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZNF24	P17028	368 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RPA3	P35244	121 aa	Predicted RBP	18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CETN2	P41208	172 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CD97	P48960	835 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	AP2B1	P63010	937 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GPSM2	P81274	684 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	BTG3	Q14201	252 aa	Predicted RBP	18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FAM196A	Q6ZSG2	479 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZNF804A	Q7Z570	1209 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	NET1	Q7Z628	596 aa	Predicted RBP	18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	BBOF1	Q8ND07	529 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	HEY2	Q9UBP5	337 aa		18.84	■□□□□ 0.61
POLR2J3-209	ENST00000504157	VILL	O15195	856 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	BUD23	O43709	281 aa	Known RBP	18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SPOP	O43791	374 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	STRN	O43815	780 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	E2F6	O75461	281 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	OR6B1	O95007	311 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CDK4	P11802	303 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ATF2	P15336	505 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TMED1	Q13445	227 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SLC1A5	Q15758	541 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ARHGAP44	Q17R89	818 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USH1G	Q495M9	461 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	MAP7D3	Q8IWC1	876 aa		18.83	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ALDH16A1	Q8IZ83	802 aa		18.83	■□□□□ 0.6

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