RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SNX21Q969T3 373 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 RPP25Q9BUL9 199 aaKnown RBP12.98□□□□□ -0.33
MED28-203ENST00000503945 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 ASB7Q9H672 318 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 GDE1Q9NZC3 331 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
MED28-203ENST00000503945 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
MED28-203ENST00000503945 AGO2Q9UKV8 859 aaKnown RBP12.98□□□□□ -0.33
MED28-203ENST00000503945 NUMBLQ9Y6R0 609 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 R4GN57 208 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
MED28-203ENST00000503945 DCHS1Q96JQ0 3298 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
MED28-203ENST00000503945 GVINP1Q7Z2Y8 2422 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 MYMKA6NI61 221 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ZNF197O14709 1029 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 RHOP08100 348 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 IDEP14735 1019 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 STAT6P42226 847 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 LILRA4P59901 499 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 HTR4Q13639 388 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ZBTB41Q5SVQ8 909 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 JADE1Q6IE81 842 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 PHLDB3Q6NSJ2 640 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 PARM1Q6UWI2 310 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 SFR1Q86XK3 245 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 SYCP3Q8IZU3 236 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ITFG1Q8TB96 612 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 SHDQ96IW2 340 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 FIZ1Q96SL8 496 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 DLGAP2Q9P1A6 1054 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 AFF4Q9UHB7 1163 aaKnown RBP12.97□□□□□ -0.33
MED28-203ENST00000503945 DERAQ9Y315 318 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
MED28-203ENST00000503945 STYXL1Q9Y6J8 313 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
MED28-203ENST00000503945 TRIP11Q15643 1979 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 ZNF292O60281 2723 aa12.97□□□□□ -0.33
MED28-203ENST00000503945 NOTCH4Q99466 2003 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 SPTLC2O15270 562 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 FAM189A1O60320 539 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 SEC24AO95486 1093 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.33
MED28-203ENST00000503945 CPB1P15086 417 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 NASPP49321 788 aaPredicted RBP12.96□□□□□ -0.33
MED28-203ENST00000503945 GPC5P78333 572 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 AMPD3Q01432 767 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 FGF14Q92915 247 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.33
MED28-203ENST00000503945 SLC2A4RGQ9NR83 387 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 PANK4Q9NVE7 773 aa12.96□□□□□ -0.33
MED28-203ENST00000503945 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
MED28-203ENST00000503945 OR6C75A6NL08 312 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 PIRO00625 290 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 PPP6R2O75170 966 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 MICAL2O94851 1124 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 GCNT3O95395 438 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 LDHAP00338 332 aaKnown RBP12.95□□□□□ -0.34
MED28-203ENST00000503945 SP9P0CG40 484 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 GLULP15104 373 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 TYMPP19971 482 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 GPR17Q13304 367 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 OVOS1Q6IE37 1185 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 PDILTQ8N807 584 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
MED28-203ENST00000503945 DNAJC19Q96DA6 116 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 STRA6Q9BX79 667 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 FOXQ1Q9C009 403 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 ARHGEF3Q9NR81 526 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 DSEQ9UL01 958 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 MIA3Q5JRA6 1907 aa12.95□□□□□ -0.34
MED28-203ENST00000503945 LRRN2O75325 713 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 IL18RAPO95256 599 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms