RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 OR2I1PQ8NGU4 316 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 SLC35G2Q8TBE7 412 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 HPS3Q969F9 1004 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 HDAC10Q969S8 669 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 SLC12A5Q9H2X9 1139 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 KIAA1586Q9HCI6 787 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 NMRK2Q9NPI5 230 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 TMEM74BQ9NUR3 256 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 GEMIN8Q9NWZ8 242 aaKnown RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 FOXJ2Q9P0K8 574 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 RNF181Q9P0P0 153 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 IPPQ9Y573 584 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 PCDHA13Q9Y5I0 950 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 FAM171A2A8MVW0 826 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 PRC1O43663 620 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 DTNBO60941 627 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 CDKL5O76039 1030 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 CBSLP0DN79 551 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 WT1P19544 449 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 CBSP35520 551 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 CASRP41180 1078 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 PER3P56645 1201 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 MGAT2Q10469 447 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 MST1LQ2TV78 715 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 PGS1Q32NB8 556 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 ARHGAP29Q52LW3 1261 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 ATAT1Q5SQI0 421 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 METRNLQ641Q3 311 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 B3GNT9Q6UX72 402 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 Q6ZNX1 250 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 Q6ZVL8 140 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 MIGA2Q7L4E1 593 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 PRR18Q8N4B5 295 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 OR10H5Q8NGA6 315 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF480Q8WV37 535 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 WASF1Q92558 559 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 KAT5Q92993 513 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 MVB12AQ96EY5 273 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 TAAR9Q96RI9 348 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 UHRF1Q96T88 793 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 MAP3K14Q99558 947 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 OBP2AQ9NY56 170 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 ARPP21Q9UBL0 812 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 GABBR1Q9UBS5 961 aa3.13□□□□□ -1.91
HMGB1P35-201ENST00000503360 UNC119BA6NIH7 251 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 LRRC3CA6NJW4 275 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 TBKBP1A7MCY6 615 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ERC2O15083 957 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ADCY6O43306 1168 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 CTNND1O60716 968 aaKnown RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ENDOD1O94919 500 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 MYBP10242 640 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ITGAMP11215 1152 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 GNALP38405 381 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 PLA2G5P39877 138 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SLC6A9P48067 706 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SOX10P56693 466 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 TBX4P57082 545 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 DUSP2Q05923 314 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SRSF4Q08170 494 aaKnown RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 RESTQ13127 1097 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 GJC2Q5T442 439 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SLC4A10Q6U841 1118 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF788Q6ZQV5 615 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 PQLC1Q8N2U9 271 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 CAMKK1Q8N5S9 505 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 FBXO18Q8NFZ0 1043 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 OR7D4Q8NG98 312 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCHCR1Q8TD31 782 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 DIS3LQ8TF46 1054 aaKnown RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 RAB24Q969Q5 203 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 C1GALT1C1Q96EU7 318 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 BOD1Q96IK1 185 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 TIMP4Q99727 224 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 ACO2Q99798 780 aaKnown RBP3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 CHMP4AQ9BY43 222 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 LDAHQ9H6V9 325 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 BCO1Q9HAY6 547 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 GPRC5DQ9NZD1 345 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SIK3Q9Y2K2 1263 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 PCDHB1Q9Y5F3 818 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 SALL3Q9BXA9 1300 aa3.12□□□□□ -1.91
HMGB1P35-201ENST00000503360 WIPF3A6NGB9 483 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 ITGA10O75578 1167 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 GASTP01350 101 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 ALDH2P05091 517 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 RPLP2P05387 115 aaKnown RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 CELA2AP08217 269 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 PTGER1P34995 402 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 CRHR1P34998 444 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 PTPN7P35236 360 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 SREBF1P36956 1147 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 SSBP2P81877 361 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 DSC2Q02487 901 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 GRM3Q14832 879 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 BMT2Q1RMZ1 405 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 SPDYE7PQ495Y7 208 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 AGAP9Q5VTM2 703 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms