RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TBC1D17Q9HA65 648 aa17.66■□□□□ 0.42
SCLT1-204ENST00000503215 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
SCLT1-204ENST00000503215 CEP72Q9P209 647 aa17.66■□□□□ 0.42
SCLT1-204ENST00000503215 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
SCLT1-204ENST00000503215 STYXL1Q9Y6J8 313 aa17.66■□□□□ 0.42
SCLT1-204ENST00000503215 COL4A3Q01955 1670 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 LRG1P02750 347 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 PTPN2P17706 415 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 SCP2P22307 547 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 NUBP1P53384 320 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 WNT7BP56706 349 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 LILRA4P59901 499 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 YWHAHQ04917 246 aaPredicted RBP17.65■□□□□ 0.42
SCLT1-204ENST00000503215 KYAT1Q16773 422 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 PRSS36Q5K4E3 855 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 C9orf57Q5W0N0 161 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 TPGS2Q68CL5 300 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 SCARA3Q6AZY7 606 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 SV2BQ7L1I2 683 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 FAM84AQ96KN4 292 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 PGLYRP2Q96PD5 576 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 TMEM209Q96SK2 561 aa17.65■□□□□ 0.42
SCLT1-204ENST00000503215 AFF4Q9UHB7 1163 aaKnown RBP17.65■□□□□ 0.42
SCLT1-204ENST00000503215 AGO2Q9UKV8 859 aaKnown RBP17.65■□□□□ 0.42
SCLT1-204ENST00000503215 PIRO00625 290 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 CPB1P15086 417 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-204ENST00000503215 TWF1Q12792 350 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 DSTYKQ6XUX3 929 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 PDILTQ8N807 584 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 DTWD2Q8NBA8 298 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 ZSWIM3Q96MP5 696 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 FOXQ1Q9C009 403 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 MRPL44Q9H9J2 332 aaKnown RBP17.64■□□□□ 0.41
SCLT1-204ENST00000503215 AVENQ9NQS1 362 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-204ENST00000503215 ARHGEF3Q9NR81 526 aa17.64■□□□□ 0.41
SCLT1-204ENST00000503215 USP34Q70CQ2 3546 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 ANO9A1A5B4 782 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 LRRN2O75325 713 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 MOSPD3O75425 235 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
SCLT1-204ENST00000503215 IDEP14735 1019 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 GJA1P17302 382 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 STAT6P42226 847 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
SCLT1-204ENST00000503215 TMEM132DQ14C87 1099 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 TANGO2Q6ICL3 276 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 EFCAB13Q8IY85 973 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 TTC9BQ8N6N2 239 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 BEST2Q8NFU1 509 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 SENP8Q96LD8 212 aa17.63■□□□□ 0.41
SCLT1-204ENST00000503215 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
SCLT1-204ENST00000503215 MORC2Q9Y6X9 1032 aaPredicted RBP17.63■□□□□ 0.41
SCLT1-204ENST00000503215 MYH15Q9Y2K3 1946 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 TXLNAP40222 546 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 DUSP4Q13115 394 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 STK38Q15208 465 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-204ENST00000503215 OVOS1Q6IE37 1185 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 SLFN12LQ6IEE8 588 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-204ENST00000503215 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 MTSS1LQ765P7 747 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 USP37Q86T82 979 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 CD302Q8IX05 232 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 ATAD1Q8NBU5 361 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 POMGNT1Q8WZA1 660 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 HPS3Q969F9 1004 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 RTP3Q9BQQ7 232 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
SCLT1-204ENST00000503215 SCN1AP35498 2009 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 TULP1O00294 542 aaPredicted RBP17.61■□□□□ 0.41
SCLT1-204ENST00000503215 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
SCLT1-204ENST00000503215 SOAT2O75908 522 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 GCNT3O95395 438 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 GLULP15104 373 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 GAP43P17677 238 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 TYMPP19971 482 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 FCARP24071 287 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 FAM78AQ5JUQ0 283 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 L1TD1Q5T7N2 865 aaKnown RBP17.61■□□□□ 0.41
SCLT1-204ENST00000503215 OR10T2Q8NGX3 314 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 SNX21Q969T3 373 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 SAAL1Q96ER3 474 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 TSPAN18Q96SJ8 248 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 PANK4Q9NVE7 773 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 DPP3Q9NY33 737 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 GDE1Q9NZC3 331 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 SEL1LQ9UBV2 794 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 DERAQ9Y315 318 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 MTF2Q9Y483 593 aaPredicted RBP17.61■□□□□ 0.41
SCLT1-204ENST00000503215 YIPF1Q9Y548 306 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 VPS13AQ96RL7 3174 aa17.61■□□□□ 0.41
SCLT1-204ENST00000503215 ANK1P16157 1881 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms