RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 TUSC3Q13454 348 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 UPP1Q16831 310 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 RABGGTAQ92696 567 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 CHP1Q99653 195 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 BAG1Q99933 345 aaPredicted RBP16.33■□□□□ 0.21
MBD4-204ENST00000503197 BCO2Q9BYV7 579 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.21
MBD4-204ENST00000503197 PTPRSQ13332 1948 aa16.33■□□□□ 0.21
MBD4-204ENST00000503197 CAPN15O75808 1086 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 CLSTN1O94985 981 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
MBD4-204ENST00000503197 STAT1P42224 750 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 DEFB103AP81534 67 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 FPGSQ05932 587 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 MYO1EQ12965 1108 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 HS1BP3Q53T59 392 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 FAM71AQ8IYT1 594 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 SDCBP2Q9H190 292 aa16.33■□□□□ 0.2
MBD4-204ENST00000503197 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
MBD4-204ENST00000503197 R3HCC1Q9Y3T6 440 aaKnown RBP16.33■□□□□ 0.2
MBD4-204ENST00000503197 GFPT2O94808 682 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 UPP2O95045 317 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 PLEKP08567 350 aaPredicted RBP16.32■□□□□ 0.2
MBD4-204ENST00000503197 WEE2P0C1S8 567 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 SKILP12757 684 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 LILRA4P59901 499 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 ARID5AQ03989 594 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 TMCO2Q7Z6W1 182 aaPredicted RBP16.32■□□□□ 0.2
MBD4-204ENST00000503197 URGCPQ8TCY9 931 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 TOP1MTQ969P6 601 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 JAKMIP2Q96AA8 810 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 ARHGAP20Q9P2F6 1191 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
MBD4-204ENST00000503197 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
MBD4-204ENST00000503197 PODXLO00592 558 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 HOXA2O43364 376 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 BAIAP3O94812 1187 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 RPL9P32969 192 aaKnown RBP16.31■□□□□ 0.2
MBD4-204ENST00000503197 CDH8P55286 799 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 TSR1Q2NL82 804 aaKnown RBP16.31■□□□□ 0.2
MBD4-204ENST00000503197 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 ZNF365Q70YC5 407 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 ZNF560Q96MR9 790 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 KPNA7A9QM74 516 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 EFCAB14O75071 495 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 DGKIO75912 1065 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 CLCN1P35523 988 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 PNPLA4P41247 253 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 RAP1GAPP47736 663 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 TAF6P49848 677 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 CDK17Q00537 523 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 ASIC2Q16515 512 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 COLGALT2Q8IYK4 626 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
MBD4-204ENST00000503197 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
MBD4-204ENST00000503197 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
MBD4-204ENST00000503197 F8W810 466 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 CYP26A1O43174 497 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 PRKCIP41743 596 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 TMEM240Q5SV17 173 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 LIMS2Q7Z4I7 341 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 DPF3Q92784 378 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
MBD4-204ENST00000503197 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.28e-7■■■□□ 16.1
MBD4-204ENST00000503197 ACP6Q9NPH0 428 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 ZNHIT6Q9NWK9 470 aaKnown RBP16.3■□□□□ 0.2
MBD4-204ENST00000503197 TBKBP1A7MCY6 615 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 FGBP02675 491 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 AMHP03971 560 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 SERPING1P05155 500 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 FERP16591 822 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 CD58P19256 250 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 USP8P40818 1118 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 TNNC1P63316 161 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 MTF1Q14872 753 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 SV2CQ496J9 727 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 RAD9BQ6WBX8 426 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 UROC1Q96N76 676 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 NRDE2Q9H7Z3 1164 aa16.3■□□□□ 0.2
MBD4-204ENST00000503197 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
MBD4-204ENST00000503197 CXXC1Q9P0U4 656 aaPredicted RBP16.3■□□□□ 0.2
MBD4-204ENST00000503197 ITGB1P05556 798 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms