RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 GLP2RO95838 553 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 TNNC2P02585 160 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 CNPP09543 421 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 TMEM191BP0C7N4 346 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 ATICP31939 592 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 GTF2H1P32780 548 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 LTBRP36941 435 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 CYP2J2P51589 502 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 CLCN4P51793 760 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 WNT7BP56706 349 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 RBP5P82980 135 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 ADAM9Q13443 819 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 SV2CQ496J9 727 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 LIMS2Q7Z4I7 341 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 SLC22A17Q8WUG5 538 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 BORCS6Q96GS4 357 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 FAM124BQ9H5Z6 455 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 HCFC2Q9Y5Z7 792 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
UBE2D3-212ENST00000502563 XIRP2A4UGR9 3374 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 KPNA7A9QM74 516 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 ODC1P11926 461 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 HOXA9P31269 272 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 MCM4P33991 863 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 NRIP1P48552 1158 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TFAMQ00059 246 aaKnown RBP11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 ITIH3Q06033 890 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 SMARCB1Q12824 385 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 BFSP1Q12934 665 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 MYO1EQ12965 1108 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 PAK1Q13153 545 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 RAB33AQ14088 237 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 PSMD5Q16401 504 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 ZACNQ401N2 412 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TPGS2Q68CL5 300 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 ZNF280DQ6N043 979 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TTI2Q6NXR4 508 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TAS1R1Q7RTX1 841 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TRAPPC11Q7Z392 1133 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 FILIP1Q7Z7B0 1213 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 SMYD4Q8IYR2 804 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TMEM86AQ8N2M4 240 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 SMRP1Q8NCR6 262 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 RIN2Q8WYP3 895 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 TAF4BQ92750 862 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 CLSTN3Q9BQT9 956 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 MTMR12Q9C0I1 747 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 METTL14Q9HCE5 456 aaKnown RBP11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 CACNG4Q9UBN1 327 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 DACH1Q9UI36 760 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 SIX4Q9UIU6 781 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 FAM50BQ9Y247 325 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 REV3LO60673 3130 aa11.57□□□□□ -0.56
UBE2D3-212ENST00000502563 OR6C75A6NL08 312 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 STX10O60499 249 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 TBX10O75333 385 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 FGFR1OPO95684 399 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 GNA14O95837 355 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 GLUD1P00367 558 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 C4BPAP04003 597 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ITGB3P05106 788 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 EPB41P11171 864 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 TNNI1P19237 187 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 BRCC3P46736 316 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 VAMP7P51809 220 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 MRPS5P82675 430 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 YWHAHQ04917 246 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 SPAG1Q07617 926 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ANKRD40Q6AI12 368 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 FRMD5Q7Z6J6 570 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 FAM186BQ8IYM0 893 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 TOP6BLQ8N6T0 577 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 OR5B17Q8NGF7 314 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ZNF461Q8TAF7 563 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 HASPINQ8TF76 798 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ERCC4Q92889 916 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 SENP8Q96LD8 212 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 ZDHHC7Q9NXF8 308 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 CLEC1BQ9P126 229 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 RWDD2AQ9UIY3 292 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 MAPK8IP1Q9UQF2 711 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 PTPRJQ12913 1337 aa11.56□□□□□ -0.56
UBE2D3-212ENST00000502563 SCN1AP35498 2009 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 GABRDO14764 452 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 SPTLC1O15269 473 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms