RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 C17orf102A2RUQ5 167 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 CEP104O60308 925 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 C6orf222P0C671 652 aaPredicted RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 GJA9P57773 515 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 PRKCZQ05513 592 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 TRIM32Q13049 653 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 TMEM132DQ14C87 1099 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 LLGL2Q6P1M3 1020 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 HDAC7Q8WUI4 952 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 ZNF606Q8WXB4 792 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 SDCBP2Q9H190 292 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 AVENQ9NQS1 362 aaPredicted RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 NOC2LQ9Y3T9 749 aaKnown RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 C2CD2Q9Y426 696 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 AOC2O75106 756 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 EIF4BP23588 611 aaKnown RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 RAP1GAPP47736 663 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 SNX17Q15036 470 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 C2CD6Q53TS8 623 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 BEND6Q5SZJ8 279 aaPredicted RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 SLC27A1Q6PCB7 646 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 ALG3Q92685 438 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 VRTNQ9H8Y1 702 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 ARFGAP3Q9NP61 516 aa19.47■□□□□ 0.71
LINC00535-201ENST00000501400 NXF1Q9UBU9 619 aaKnown RBP19.47■□□□□ 0.71
LINC00535-201ENST00000501400 TMEM110-MUSTN1A8MSY1 372 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 TUBBP07437 444 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 RRM1P23921 792 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 BRD2P25440 801 aaKnown RBP19.46■□□□□ 0.71
LINC00535-201ENST00000501400 POLR2BP30876 1174 aaKnown RBP19.46■□□□□ 0.71
LINC00535-201ENST00000501400 NSFP46459 744 aaKnown RBP19.46■□□□□ 0.71
LINC00535-201ENST00000501400 MARCKSL1P49006 195 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 PTP4A2Q12974 167 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 MESDQ14696 234 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 LONRF2Q1L5Z9 754 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 ZNF394Q53GI3 561 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 MFSD14CQ5VZR4 134 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 CD101Q93033 1021 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 UPF3AQ9H1J1 476 aaKnown RBP19.46■□□□□ 0.71
LINC00535-201ENST00000501400 FAM53CQ9NYF3 392 aa19.46■□□□□ 0.71
LINC00535-201ENST00000501400 DMGDHQ9UI17 866 aaKnown RBP19.46■□□□□ 0.71
LINC00535-201ENST00000501400 PGRMC1O00264 195 aaKnown RBP19.45■□□□□ 0.7
LINC00535-201ENST00000501400 ZMYND10O75800 440 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SASH3O75995 380 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 ALDH1A1P00352 501 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 COMTP21964 271 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 PCBP1Q15365 356 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC00535-201ENST00000501400 WDR72Q3MJ13 1102 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 ZNF667Q5HYK9 610 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 NOTUMQ6P988 496 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 TFAP2BQ92481 460 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 KRT35Q92764 455 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SNX27Q96L92 541 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC00535-201ENST00000501400 TRIM7Q9C029 511 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 CARD9Q9H257 536 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SMYD3Q9H7B4 428 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SNTG2Q9NY99 539 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 PGK1P00558 417 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 MYBL1P10243 752 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SMYD5Q6GMV2 418 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 PHF13Q86YI8 300 aaPredicted RBP19.45■□□□□ 0.7
LINC00535-201ENST00000501400 C7orf31Q8N865 590 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 RPS6KC1Q96S38 1066 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 C11orf70Q9BRQ4 267 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SELENOOQ9BVL4 669 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 NXF3Q9H4D5 531 aaKnown RBP19.45■□□□□ 0.7
LINC00535-201ENST00000501400 SCN1AP35498 2009 aa19.45■□□□□ 0.7
LINC00535-201ENST00000501400 THSD7BQ9C0I4 1608 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 MYBL2P10244 700 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 ATICP31939 592 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 CDH8P55286 799 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 NOGQ13253 232 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 TRIM11Q96F44 468 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 ZMAT2Q96NC0 199 aaKnown RBP19.44■□□□□ 0.7
LINC00535-201ENST00000501400 FUT8Q9BYC5 575 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 HMGXB4Q9UGU5 601 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 ITGA11Q9UKX5 1188 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 TTC7AQ9ULT0 858 aaPredicted RBP19.44■□□□□ 0.7
LINC00535-201ENST00000501400 HES2Q9Y543 173 aa19.44■□□□□ 0.7
LINC00535-201ENST00000501400 MIF4GDA9UHW6 222 aaKnown RBP19.43■□□□□ 0.7
LINC00535-201ENST00000501400 NKX3-2P78367 333 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 SLC7A5Q01650 507 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 GNASQ5JWF2 1037 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 C8orf74Q6P047 294 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 CXCL17Q6UXB2 119 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 PHLDB2Q86SQ0 1253 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 NT5DC4Q86YG4 428 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 CD302Q8IX05 232 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 WHAMMQ8TF30 809 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 KIF12Q96FN5 646 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 MTG1Q9BT17 334 aaPredicted RBP19.43■□□□□ 0.7
LINC00535-201ENST00000501400 DPP3Q9NY33 737 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 SEPT4O43236 478 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 CACNB2Q08289 660 aaPredicted RBP19.43■□□□□ 0.7
LINC00535-201ENST00000501400 MMS22LQ6ZRQ5 1243 aa19.43■□□□□ 0.7
LINC00535-201ENST00000501400 RNPC3Q96LT9 517 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms